RNA–Protein interactions for RNA: ENST00000411651.6

SUMO3-204, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 1,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-204ENST00000411651 EPHB3P54753 998 aa20.25■□□□□ 0.83
SUMO3-204ENST00000411651 UBAP2LQ14157 1087 aaKnown RBP20.25■□□□□ 0.83
SUMO3-204ENST00000411651 INO80DQ53TQ3 878 aaPredicted RBP20.25■□□□□ 0.83
SUMO3-204ENST00000411651 SPOUT1Q5T280 376 aaKnown RBP20.25■□□□□ 0.83
SUMO3-204ENST00000411651 CXorf57Q6NSI4 855 aaKnown RBP20.25■□□□□ 0.83
SUMO3-204ENST00000411651 TDRD1Q9BXT4 1180 aaKnown RBP20.25■□□□□ 0.83
SUMO3-204ENST00000411651 RNF38Q9H0F5 515 aa20.25■□□□□ 0.83
SUMO3-204ENST00000411651 TCF7L2Q9NQB0 619 aa20.25■□□□□ 0.83
SUMO3-204ENST00000411651 ASB3Q9Y575 518 aa20.25■□□□□ 0.83
SUMO3-204ENST00000411651 GFRA2O00451 464 aa20.25■□□□□ 0.83
SUMO3-204ENST00000411651 CD3EAPO15446 510 aaKnown RBP20.25■□□□□ 0.83
SUMO3-204ENST00000411651 PIGNO95427 931 aa20.25■□□□□ 0.83
SUMO3-204ENST00000411651 GM2AP17900 193 aa20.25■□□□□ 0.83
SUMO3-204ENST00000411651 TFEBP19484 476 aa20.25■□□□□ 0.83
SUMO3-204ENST00000411651 FDXRP22570 491 aa20.25■□□□□ 0.83
SUMO3-204ENST00000411651 ZNF140P52738 457 aaPredicted RBP20.25■□□□□ 0.83
SUMO3-204ENST00000411651 USP4Q13107 963 aa20.25■□□□□ 0.83
SUMO3-204ENST00000411651 TAF1AQ15573 450 aaPredicted RBP20.25■□□□□ 0.83
SUMO3-204ENST00000411651 ZNF789Q5FWF6 425 aa20.25■□□□□ 0.83
SUMO3-204ENST00000411651 DNAJB7Q7Z6W7 309 aaPredicted RBP20.25■□□□□ 0.83
SUMO3-204ENST00000411651 SDCCAG8Q86SQ7 713 aaPredicted RBP20.25■□□□□ 0.83
SUMO3-204ENST00000411651 FAM217AQ8IXS0 508 aa20.25■□□□□ 0.83
SUMO3-204ENST00000411651 BLOC1S5Q8TDH9 187 aa20.25■□□□□ 0.83
SUMO3-204ENST00000411651 FAR2Q96K12 515 aa20.25■□□□□ 0.83
SUMO3-204ENST00000411651 ZFRQ96KR1 1074 aaKnown RBP20.25■□□□□ 0.83
SUMO3-204ENST00000411651 TBATAQ96M53 351 aa20.25■□□□□ 0.83
SUMO3-204ENST00000411651 TCF12Q99081 682 aa20.25■□□□□ 0.83
SUMO3-204ENST00000411651 SPON2Q9BUD6 331 aa20.25■□□□□ 0.83
SUMO3-204ENST00000411651 TMEM39AQ9NV64 488 aa20.25■□□□□ 0.83
SUMO3-204ENST00000411651 INSL5Q9Y5Q6 135 aa20.25■□□□□ 0.83
SUMO3-204ENST00000411651 PLXNA4Q9HCM2 1894 aa20.25■□□□□ 0.83
SUMO3-204ENST00000411651 TTC24A2A3L6 582 aaPredicted RBP20.24■□□□□ 0.83
SUMO3-204ENST00000411651 GOT2P00505 430 aaKnown RBP20.24■□□□□ 0.83
SUMO3-204ENST00000411651 CLTBP09497 229 aa20.24■□□□□ 0.83
SUMO3-204ENST00000411651 COPAP53621 1224 aa20.24■□□□□ 0.83
SUMO3-204ENST00000411651 NFKB2Q00653 900 aa20.24■□□□□ 0.83
SUMO3-204ENST00000411651 KDSRQ06136 332 aa20.24■□□□□ 0.83
SUMO3-204ENST00000411651 LSMEM2Q8N112 164 aa20.24■□□□□ 0.83
SUMO3-204ENST00000411651 OR4L1Q8NH43 312 aa20.24■□□□□ 0.83
SUMO3-204ENST00000411651 DNAJC1Q96KC8 554 aaKnown RBP20.24■□□□□ 0.83
SUMO3-204ENST00000411651 TRMOQ9BU70 441 aa20.24■□□□□ 0.83
SUMO3-204ENST00000411651 SCUBE2Q9NQ36 999 aa20.24■□□□□ 0.83
SUMO3-204ENST00000411651 CATSPERZQ9NTU4 200 aa20.24■□□□□ 0.83
SUMO3-204ENST00000411651 L3MBTL1Q9Y468 752 aa20.24■□□□□ 0.83
SUMO3-204ENST00000411651 KIAA1671Q9BY89 1806 aa20.24■□□□□ 0.83
SUMO3-204ENST00000411651 PRRG1O14668 218 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 IPO13O94829 963 aaKnown RBP20.23■□□□□ 0.83
SUMO3-204ENST00000411651 F11P03951 625 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 CHRNGP07510 517 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 TPBGLP0DKB5 382 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 MPSTP25325 297 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 CPOXP36551 454 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 STC1P52823 247 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 SATB1Q01826 763 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 TWF1Q12792 350 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 CSHL1Q14406 222 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 CYTH1Q15438 398 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 SH2D4BQ5SQS7 431 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 AFTPHQ6ULP2 937 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 NET1Q7Z628 596 aaPredicted RBP20.23■□□□□ 0.83
SUMO3-204ENST00000411651 TMEM150AQ86TG1 271 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 TXNDC5Q8NBS9 432 aaKnown RBP20.23■□□□□ 0.83
SUMO3-204ENST00000411651 HJURPQ8NCD3 748 aaPredicted RBP20.23■□□□□ 0.83
SUMO3-204ENST00000411651 NDNQ99608 321 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 GKN1Q9NS71 199 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 MARCH4Q9P2E8 410 aaPredicted RBP20.23■□□□□ 0.83
SUMO3-204ENST00000411651 VPS9D1Q9Y2B5 631 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 SSX2IPQ9Y2D8 614 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 ARL5AQ9Y689 179 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 TYW5A2RUC4 315 aaKnown RBP20.23■□□□□ 0.83
SUMO3-204ENST00000411651 C2orf78A6NCI8 922 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 CCDC166P0CW27 439 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 GALNT3Q14435 633 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 TRMT5Q32P41 509 aaKnown RBP20.23■□□□□ 0.83
SUMO3-204ENST00000411651 SLC9B1Q4ZJI4 515 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 ACAD11Q709F0 780 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 CPSF7Q8N684 471 aaKnown RBP20.23■□□□□ 0.83
SUMO3-204ENST00000411651 CDKN2AIPNLQ96HQ2 116 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 ADGRE3Q9BY15 652 aa20.23■□□□□ 0.83
SUMO3-204ENST00000411651 EML4Q9HC35 981 aaKnown RBP20.23■□□□□ 0.83
SUMO3-204ENST00000411651 MRPL17Q9NRX2 175 aaKnown RBP20.23■□□□□ 0.83
SUMO3-204ENST00000411651 CCDC189A1A4V9 331 aa20.22■□□□□ 0.83
SUMO3-204ENST00000411651 CCDC162PA2VCL2 907 aa20.22■□□□□ 0.83
SUMO3-204ENST00000411651 TRPC5OSA6NMA1 111 aa20.22■□□□□ 0.83
SUMO3-204ENST00000411651 GRID2O43424 1007 aa20.22■□□□□ 0.83
SUMO3-204ENST00000411651 GJB3O75712 270 aa20.22■□□□□ 0.83
SUMO3-204ENST00000411651 ANP32DO95626 131 aa20.22■□□□□ 0.83
SUMO3-204ENST00000411651 C1RP00736 705 aa20.22■□□□□ 0.83
SUMO3-204ENST00000411651 MBL2P11226 248 aaPredicted RBP20.22■□□□□ 0.83
SUMO3-204ENST00000411651 GCKP35557 465 aa20.22■□□□□ 0.83
SUMO3-204ENST00000411651 SGSHP51688 502 aa20.22■□□□□ 0.83
SUMO3-204ENST00000411651 NAA25Q14CX7 972 aa20.22■□□□□ 0.83
SUMO3-204ENST00000411651 E2F5Q15329 346 aa20.22■□□□□ 0.83
SUMO3-204ENST00000411651 VWA5B1Q5TIE3 1220 aa20.22■□□□□ 0.83
SUMO3-204ENST00000411651 Q6ZNB5 142 aa20.22■□□□□ 0.83
SUMO3-204ENST00000411651 TRIM67Q6ZTA4 783 aa20.22■□□□□ 0.83
SUMO3-204ENST00000411651 SCUBE1Q8IWY4 988 aa20.22■□□□□ 0.83
SUMO3-204ENST00000411651 AFAP1L2Q8N4X5 818 aa20.22■□□□□ 0.83
SUMO3-204ENST00000411651 MAPK15Q8TD08 544 aa20.22■□□□□ 0.83
SUMO3-204ENST00000411651 MAELQ96JY0 434 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms