RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 UNGP13051 313 aaPredicted RBP16.81■□□□□ 0.28
MRPL55-220ENST00000411464 ITIH1P19827 911 aa16.81■□□□□ 0.28
MRPL55-220ENST00000411464 KELP23276 732 aa16.81■□□□□ 0.28
MRPL55-220ENST00000411464 MMP12P39900 470 aa16.81■□□□□ 0.28
MRPL55-220ENST00000411464 AIF1P55008 147 aa16.81■□□□□ 0.28
MRPL55-220ENST00000411464 GSCP56915 257 aaPredicted RBP16.81■□□□□ 0.28
MRPL55-220ENST00000411464 PTP4A2Q12974 167 aa16.81■□□□□ 0.28
MRPL55-220ENST00000411464 SRSF6Q13247 344 aaKnown RBP16.81■□□□□ 0.28
MRPL55-220ENST00000411464 CAMK1DQ8IU85 385 aa16.81■□□□□ 0.28
MRPL55-220ENST00000411464 PLA2G15Q8NCC3 412 aa16.81■□□□□ 0.28
MRPL55-220ENST00000411464 C3orf20Q8ND61 904 aa16.81■□□□□ 0.28
MRPL55-220ENST00000411464 OR1E3Q8WZA6 343 aa16.81■□□□□ 0.28
MRPL55-220ENST00000411464 GANQ9H2C0 597 aa16.81■□□□□ 0.28
MRPL55-220ENST00000411464 DPEP2Q9H4A9 486 aa16.81■□□□□ 0.28
MRPL55-220ENST00000411464 ATP13A3Q9H7F0 1226 aa16.81■□□□□ 0.28
MRPL55-220ENST00000411464 NLRC4Q9NPP4 1024 aa16.81■□□□□ 0.28
MRPL55-220ENST00000411464 FAM207AQ9NSI2 230 aaPredicted RBP16.81■□□□□ 0.28
MRPL55-220ENST00000411464 AKAP7Q9P0M2 348 aaPredicted RBP16.81■□□□□ 0.28
MRPL55-220ENST00000411464 FZD10Q9ULW2 581 aa16.81■□□□□ 0.28
MRPL55-220ENST00000411464 RNF215Q9Y6U7 377 aa16.81■□□□□ 0.28
MRPL55-220ENST00000411464 RP1P56715 2156 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 TMEM202A6NGA9 273 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 J3KR12 359 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 TNFRSF10CO14798 259 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 FGF10O15520 208 aaPredicted RBP16.8■□□□□ 0.28
MRPL55-220ENST00000411464 CCP110O43303 1012 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 RECQL5O94762 991 aaPredicted RBP16.8■□□□□ 0.28
MRPL55-220ENST00000411464 PRKCGP05129 697 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 TPM2P07951 284 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 DESP17661 470 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 STAT1P42224 750 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 ZNF143P52747 638 aaPredicted RBP16.8■□□□□ 0.28
MRPL55-220ENST00000411464 MAPK10P53779 464 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 KIAA1024LP59773 190 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 C14orf28Q4W4Y0 310 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 PHF19Q5T6S3 580 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 TMEM164Q5U3C3 297 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 KCTD16Q68DU8 428 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 ATG14Q6ZNE5 492 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 SPRED1Q7Z699 444 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 ZFAND4Q86XD8 727 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 PHF13Q86YI8 300 aaPredicted RBP16.8■□□□□ 0.28
MRPL55-220ENST00000411464 USP7Q93009 1102 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 FUBP1Q96AE4 644 aaKnown RBP16.8■□□□□ 0.28
MRPL55-220ENST00000411464 PCDHB18PQ96TA0 734 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 VPS16Q9H269 839 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 CLSTN2Q9H4D0 955 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 STARD5Q9NSY2 213 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 MOSPD1Q9UJG1 213 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 DOCK4Q8N1I0 1966 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 COL27A1Q8IZC6 1860 aaPredicted RBP16.8■□□□□ 0.28
MRPL55-220ENST00000411464 MYO18BQ8IUG5 2567 aa16.8■□□□□ 0.28
MRPL55-220ENST00000411464 B4DGG1 531 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 NUDT21O43809 227 aaKnown RBP16.79■□□□□ 0.28
MRPL55-220ENST00000411464 PRAMEF11O60813 436 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 PALMO75781 387 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 HOXC4P09017 264 aaPredicted RBP16.79■□□□□ 0.28
MRPL55-220ENST00000411464 FAM87AP0C7U9 286 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 SERPINA4P29622 427 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 CSNK1DP48730 415 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 KLK7P49862 253 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 NDST2P52849 883 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 JAM2P57087 298 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 TPI1P60174 286 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 POLR2LP62875 67 aaKnown RBP16.79■□□□□ 0.28
MRPL55-220ENST00000411464 HLTFQ14527 1009 aaKnown RBP eCLIP16.79■□□□□ 0.28
MRPL55-220ENST00000411464 SYCP1Q15431 976 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 CLEC16AQ2KHT3 1053 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 FKBP15Q5T1M5 1219 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 DNAJC24Q6P3W2 148 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 SRLQ86TD4 932 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 VASH2Q86V25 355 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 PIM3Q86V86 326 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 ZSWIM9Q86XI8 627 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 KIAA1524Q8TCG1 905 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 TRIM4Q9C037 500 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 TMEM168Q9H0V1 697 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 PDFQ9HBH1 243 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 CYP4F12Q9HCS2 524 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 FGF22Q9HCT0 170 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 MRPL40Q9NQ50 206 aaKnown RBP16.79■□□□□ 0.28
MRPL55-220ENST00000411464 SEPT11Q9NVA2 429 aaKnown RBP16.79■□□□□ 0.28
MRPL55-220ENST00000411464 PCDHGA4Q9Y5G9 962 aa16.79■□□□□ 0.28
MRPL55-220ENST00000411464 A0A1W2PQC6 194 aa16.78■□□□□ 0.28
MRPL55-220ENST00000411464 ARHGAP42A6NI28 874 aa16.78■□□□□ 0.28
MRPL55-220ENST00000411464 PDE2AO00408 941 aaPredicted RBP16.78■□□□□ 0.28
MRPL55-220ENST00000411464 ZW10O43264 779 aa16.78■□□□□ 0.28
MRPL55-220ENST00000411464 ELFN1P0C7U0 828 aa16.78■□□□□ 0.28
MRPL55-220ENST00000411464 CD82P27701 267 aa16.78■□□□□ 0.28
MRPL55-220ENST00000411464 HTR7P34969 479 aa16.78■□□□□ 0.28
MRPL55-220ENST00000411464 ETV5P41161 510 aa16.78■□□□□ 0.28
MRPL55-220ENST00000411464 BCL2L1Q07817 233 aa16.78■□□□□ 0.28
MRPL55-220ENST00000411464 TSR1Q2NL82 804 aaKnown RBP16.78■□□□□ 0.28
MRPL55-220ENST00000411464 MAP9Q49MG5 647 aa16.78■□□□□ 0.28
MRPL55-220ENST00000411464 CT47A1Q5JQC4 288 aaPredicted RBP16.78■□□□□ 0.28
MRPL55-220ENST00000411464 SPECC1LQ69YQ0 1117 aa16.78■□□□□ 0.28
MRPL55-220ENST00000411464 SLITRK4Q8IW52 837 aa16.78■□□□□ 0.28
MRPL55-220ENST00000411464 CELF6Q96J87 481 aaKnown RBP16.78■□□□□ 0.28
MRPL55-220ENST00000411464 CNPY3Q9BT09 278 aa16.78■□□□□ 0.28
MRPL55-220ENST00000411464 LRRC19Q9H756 370 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms