RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 GAS2L1Q99501 681 aaPredicted RBP13.64□□□□□ -0.23
LIMS1-205ENST00000410093 OMDQ99983 421 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 KLF16Q9BXK1 252 aaPredicted RBP13.64□□□□□ -0.23
LIMS1-205ENST00000410093 ANAPC1Q9H1A4 1944 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 TTYH1Q9H313 450 aaPredicted RBP13.64□□□□□ -0.23
LIMS1-205ENST00000410093 ZNF358Q9NW07 568 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 SPG21Q9NZD8 308 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.64□□□□□ -0.23
LIMS1-205ENST00000410093 SLC2A6Q9UGQ3 507 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 ZNF510Q9Y2H8 683 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 VWA7Q9Y334 891 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 ZFP37Q9Y6Q3 630 aaPredicted RBP13.64□□□□□ -0.23
LIMS1-205ENST00000410093 NUMBLQ9Y6R0 609 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 PLXNA4Q9HCM2 1894 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 TRPC5OSA6NMA1 111 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 H3BNC9 293 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 GOLGA8TH3BQL2 631 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 MATN2O00339 956 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 PHGDHO43175 533 aaKnown RBP13.64□□□□□ -0.23
LIMS1-205ENST00000410093 LYPLA1O75608 230 aaPredicted RBP13.64□□□□□ -0.23
LIMS1-205ENST00000410093 URODP06132 367 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 RHOCP08134 193 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 HOXD9P28356 352 aaPredicted RBP13.64□□□□□ -0.23
LIMS1-205ENST00000410093 SLC6A4P31645 630 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 ACVRL1P37023 503 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 PBX2P40425 430 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 GRIA4P48058 902 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 NUMBP49757 651 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 ALDH18A1P54886 795 aaKnown RBP13.64□□□□□ -0.23
LIMS1-205ENST00000410093 TAS2R39P59534 338 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 MAXP61244 160 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 SATB1Q01826 763 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 TCTN1Q2MV58 587 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 INO80DQ53TQ3 878 aaPredicted RBP13.64□□□□□ -0.23
LIMS1-205ENST00000410093 SEL1L3Q68CR1 1132 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 ACAD11Q709F0 780 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 GPATCH11Q8N954 259 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 OR6P1Q8NGX9 317 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 KCTD4Q8WVF5 259 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 UBXN10Q96LJ8 280 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 ADGRE3Q9BY15 652 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 ATXN3LQ9H3M9 355 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 ZNF395Q9H8N7 513 aaPredicted RBP13.64□□□□□ -0.23
LIMS1-205ENST00000410093 CYP4F11Q9HBI6 524 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 CD248Q9HCU0 757 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 HACD3Q9P035 362 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 YIPF1Q9Y548 306 aa13.64□□□□□ -0.23
LIMS1-205ENST00000410093 ANKRD36A6QL64 1941 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 KIAA1671Q9BY89 1806 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.63□□□□□ -0.23
LIMS1-205ENST00000410093 INSIG1O15503 277 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 CIB2O75838 187 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 TM7SF2O76062 418 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 ENO1P06733 434 aaKnown RBP13.63□□□□□ -0.23
LIMS1-205ENST00000410093 CD9P21926 228 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 CORO1AP31146 461 aaKnown RBP13.63□□□□□ -0.23
LIMS1-205ENST00000410093 GCKP35557 465 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 PGM1P36871 562 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 IRX1P78414 480 aaPredicted RBP13.63□□□□□ -0.23
LIMS1-205ENST00000410093 TAF1AQ15573 450 aaPredicted RBP13.63□□□□□ -0.23
LIMS1-205ENST00000410093 TRMT5Q32P41 509 aaKnown RBP13.63□□□□□ -0.23
LIMS1-205ENST00000410093 SPOUT1Q5T280 376 aaKnown RBP13.63□□□□□ -0.23
LIMS1-205ENST00000410093 HECTD2Q5U5R9 776 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 PPP2R2DQ66LE6 453 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 TMC7Q7Z402 723 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 NET1Q7Z628 596 aaPredicted RBP13.63□□□□□ -0.23
LIMS1-205ENST00000410093 TTC7BQ86TV6 843 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 DENND1CQ8IV53 801 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 CEP97Q8IW35 865 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 MYLIPQ8WY64 445 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 HDAC10Q969S8 669 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 TRIB3Q96RU7 358 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 MIPEPQ99797 713 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 EBF4Q9BQW3 602 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 ZBED2Q9BTP6 218 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 NKX2-4Q9H2Z4 354 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 COG4Q9H9E3 785 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 GPAMQ9HCL2 828 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 PNPOQ9NVS9 261 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 NDE1Q9NXR1 346 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 XPR1Q9UBH6 696 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 COMMD10Q9Y6G5 202 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 COL4A6Q14031 1691 aa13.63□□□□□ -0.23
LIMS1-205ENST00000410093 C2orf81A6NN90 581 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 TK2O00142 265 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 CD3EAPO15446 510 aaKnown RBP13.62□□□□□ -0.23
LIMS1-205ENST00000410093 ADAM12O43184 909 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 DIAPH2O60879 1101 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 S1PR4O95977 384 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 CR2P20023 1033 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 SAT1P21673 171 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 SUOXP51687 545 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 COPAP53621 1224 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 PFKPQ01813 784 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 TYSND1Q2T9J0 566 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 AFTPHQ6ULP2 937 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 RINLQ6ZS11 566 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 ZNF781Q8N8C0 355 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 HJURPQ8NCD3 748 aaPredicted RBP13.62□□□□□ -0.23
LIMS1-205ENST00000410093 OR4L1Q8NH43 312 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms