RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 LZTR1Q8N653 840 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 AARSD1Q9BTE6 412 aaKnown RBP11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 NOL6Q9H6R4 1146 aaKnown RBP11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 DUS2Q9NX74 493 aaKnown RBP11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 TAGLN3Q9UI15 199 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 CHP2O43745 196 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 SNX4O95219 450 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 CALCAP01258 141 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 ZNF549Q6P9A3 640 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 KCT2Q8NC54 265 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 TMEM216Q9P0N5 145 aa11.28□□□□□ -0.6
PRPF40A-202ENST00000410080 MSX1P28360 303 aa11.27□□□□□ -0.6
PRPF40A-202ENST00000410080 MAXP61244 160 aa11.27□□□□□ -0.6
PRPF40A-202ENST00000410080 MEA1Q16626 185 aa11.27□□□□□ -0.6
PRPF40A-202ENST00000410080 ZNF730Q6ZMV8 503 aa11.27□□□□□ -0.6
PRPF40A-202ENST00000410080 RTL4Q6ZR62 310 aa11.27□□□□□ -0.6
PRPF40A-202ENST00000410080 OFCC1Q8IZS5 231 aa11.27□□□□□ -0.6
PRPF40A-202ENST00000410080 ZNF518BQ9C0D4 1074 aa11.27□□□□□ -0.6
PRPF40A-202ENST00000410080 PAIP1Q9H074 479 aaKnown RBP11.27□□□□□ -0.6
PRPF40A-202ENST00000410080 OR12D3Q9UGF7 316 aa11.27□□□□□ -0.6
PRPF40A-202ENST00000410080 MRPS33Q9Y291 106 aaKnown RBP11.27□□□□□ -0.6
PRPF40A-202ENST00000410080 HES2Q9Y543 173 aa11.27□□□□□ -0.6
PRPF40A-202ENST00000410080 A0A1W2PRG6 482 aa11.27□□□□□ -0.6
PRPF40A-202ENST00000410080 ELNP15502 786 aa11.27□□□□□ -0.6
PRPF40A-202ENST00000410080 MYBPC2Q14324 1141 aa11.27□□□□□ -0.6
PRPF40A-202ENST00000410080 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.27□□□□□ -0.6
PRPF40A-202ENST00000410080 SCIMPQ6UWF3 145 aa11.27□□□□□ -0.6
PRPF40A-202ENST00000410080 ARHGEF19Q8IW93 802 aa11.27□□□□□ -0.6
PRPF40A-202ENST00000410080 ADHFE1Q8IWW8 467 aa11.27□□□□□ -0.6
PRPF40A-202ENST00000410080 CFAP206Q8IYR0 622 aa11.27□□□□□ -0.6
PRPF40A-202ENST00000410080 PNO1Q9NRX1 252 aaKnown RBP11.27□□□□□ -0.6
PRPF40A-202ENST00000410080 PLK2Q9NYY3 685 aa11.27□□□□□ -0.6
PRPF40A-202ENST00000410080 CNOT6Q9ULM6 557 aaKnown RBP11.27□□□□□ -0.6
PRPF40A-202ENST00000410080 NCOA3Q9Y6Q9 1424 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 UBE2QL1A1L167 161 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 SERPINA3P01011 423 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 LDLRP01130 860 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 ANPEPP15144 967 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 TTPAP49638 278 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 INO80DQ53TQ3 878 aaPredicted RBP11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 FRRS1Q6ZNA5 592 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 ZCCHC23Q6ZST2 131 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 ZFPM1Q8IX07 1006 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 DNAAF1Q8NEP3 725 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 ANKS1AQ92625 1134 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 TESCQ96BS2 214 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 ZNF607Q96SK3 696 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 TCF25Q9BQ70 676 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 CD84Q9UIB8 345 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 ZNF879B4DU55 563 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 DHPSP49366 369 aaPredicted RBP11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 SLC13A2Q13183 592 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 CXXC5Q7LFL8 322 aaKnown RBP11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 DGLUCYQ7Z3D6 616 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 LIX1Q8N485 282 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 OR6Y1Q8NGX8 325 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 KLK6Q92876 244 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 ZBTB45Q96K62 511 aaPredicted RBP11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 SGK2Q9HBY8 427 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 GJB6O95452 261 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 CCNB1P14635 433 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 INTS11Q5TA45 600 aaKnown RBP11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 MPP5Q8N3R9 675 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 NKX2-3Q8TAU0 364 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 ULBP1Q9BZM6 244 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 TRHDEQ9UKU6 1024 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 CORO2BQ9UQ03 480 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 E5RJQ4 531 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 IL33O95760 270 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 IFNA6P05013 189 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 CDH3P22223 829 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 ABCG1P45844 678 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 RPS6KA3P51812 740 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 MAPK14Q16539 360 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 NDUFA9Q16795 377 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 REXO1L1PQ8IX06 675 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 TMEM86AQ8N2M4 240 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 CHST4Q8NCG5 386 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 EMID1Q96A84 441 aaPredicted RBP11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 UROC1Q96N76 676 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 RGS17Q9UGC6 210 aaPredicted RBP11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 PCDHGC5Q9Y5F6 944 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 PCDHA3Q9Y5H8 950 aa11.27□□□□□ -0.61
PRPF40A-202ENST00000410080 CCDC182A6NF36 153 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 FAM228BP0C875 321 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 CYP4B1P13584 511 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 NPR3P17342 541 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 RPL21P46778 160 aaKnown RBP11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 CACNA2D1P54289 1103 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 PSMD5Q16401 504 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 ZNF720Q7Z2F6 126 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 CADM2Q8N3J6 435 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 IL12RB2Q99665 862 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 IKZF2Q9UKS7 526 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 WBP11Q9Y2W2 641 aaKnown RBP11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 STXBP5Q5T5C0 1151 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 CXorf57Q6NSI4 855 aaKnown RBP11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 HID1Q8IV36 788 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 ADAM7Q9H2U9 754 aa11.26□□□□□ -0.61
PRPF40A-202ENST00000410080 NAXEQ8NCW5 288 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms