RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 FGD3Q5JSP0 725 aa9.12□□□□□ -0.95
PBRM1-208ENST00000410007 TCHHL1Q5QJ38 904 aaPredicted RBP9.12□□□□□ -0.95
PBRM1-208ENST00000410007 RFWD3Q6PCD5 774 aa9.12□□□□□ -0.95
PBRM1-208ENST00000410007 IZUMO2Q6UXV1 221 aa9.12□□□□□ -0.95
PBRM1-208ENST00000410007 RAVER1Q8IY67 606 aaKnown RBP9.12□□□□□ -0.95
PBRM1-208ENST00000410007 CLYBLQ8N0X4 340 aa9.12□□□□□ -0.95
PBRM1-208ENST00000410007 OR4K2Q8NGD2 314 aa9.12□□□□□ -0.95
PBRM1-208ENST00000410007 STYXQ8WUJ0 223 aa9.12□□□□□ -0.95
PBRM1-208ENST00000410007 TFAP2BQ92481 460 aa9.12□□□□□ -0.95
PBRM1-208ENST00000410007 NDRG1Q92597 394 aaKnown RBP9.12□□□□□ -0.95
PBRM1-208ENST00000410007 APOBEC3GQ9HC16 384 aaKnown RBP9.12□□□□□ -0.95
PBRM1-208ENST00000410007 EVLQ9UI08 416 aaPredicted RBP9.12□□□□□ -0.95
PBRM1-208ENST00000410007 ERVW-1Q9UQF0 538 aa9.12□□□□□ -0.95
PBRM1-208ENST00000410007 CPQQ9Y646 472 aa9.12□□□□□ -0.95
PBRM1-208ENST00000410007 C2CD4BA6NLJ0 364 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 SLC38A8A6NNN8 435 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 FFAR3O14843 346 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 AZIN1O14977 448 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 GPR42O15529 346 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 SASH3O75995 380 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 CCNDBP1O95273 360 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 PROCP04070 461 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 IFNA16P05015 189 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 SNRPB2P08579 225 aaKnown RBP9.11□□□□□ -0.95
PBRM1-208ENST00000410007 COL6A1P12109 1028 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 COL6A2P12110 1019 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 ADSSP30520 456 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 COPZ1P61923 177 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 GSTA3Q16772 222 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 AP5B1Q2VPB7 878 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 R3HCC1LQ7Z5L2 792 aaKnown RBP9.11□□□□□ -0.95
PBRM1-208ENST00000410007 TERB1Q8NA31 727 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 ANKRD27Q96NW4 1050 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 FERD3LQ96RJ6 166 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 APOL4Q9BPW4 351 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 SPATA5L1Q9BVQ7 753 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 GPR88Q9GZN0 384 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 C11orf49Q9H6J7 331 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 DDX28Q9NUL7 540 aaKnown RBP9.11□□□□□ -0.95
PBRM1-208ENST00000410007 DUS2Q9NX74 493 aaKnown RBP9.11□□□□□ -0.95
PBRM1-208ENST00000410007 CORO2BQ9UQ03 480 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 MRPS17Q9Y2R5 130 aaKnown RBP9.11□□□□□ -0.95
PBRM1-208ENST00000410007 PTPRJQ12913 1337 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 CCDC189A1A4V9 331 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 MATN3O15232 486 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 AP2A1O95782 977 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 EPHX1P07099 455 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 SOX6P35712 828 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 SPAM1P38567 509 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 CCR3P51677 355 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 PRKG2Q13237 762 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 OTUD3Q5T2D3 398 aaPredicted RBP9.11□□□□□ -0.95
PBRM1-208ENST00000410007 STK32CQ86UX6 486 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 TCAIMQ8N3R3 496 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 RTL3Q8N8U3 475 aaKnown RBP9.11□□□□□ -0.95
PBRM1-208ENST00000410007 NETO2Q8NC67 525 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 C9orf16Q9BUW7 83 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 SNX3O60493 162 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 SERPINI2O75830 405 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 CDK14O94921 469 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 POP4O95707 220 aaKnown RBP9.11□□□□□ -0.95
PBRM1-208ENST00000410007 C21orf59P57076 290 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 GAD2Q05329 585 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 FPGSQ05932 587 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 HNRNPDQ14103 355 aaKnown RBP9.11□□□□□ -0.95
PBRM1-208ENST00000410007 GRB14Q14449 540 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 CBX2Q14781 532 aaPredicted RBP9.11□□□□□ -0.95
PBRM1-208ENST00000410007 TTMPQ5BVD1 217 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 ZNF618Q5T7W0 954 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 RASAL3Q86YV0 1011 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 PHYKPLQ8IUZ5 450 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 RNF148Q8N7C7 305 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 OR6Y1Q8NGX8 325 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 PRCCQ92733 491 aaPredicted RBP9.11□□□□□ -0.95
PBRM1-208ENST00000410007 COL26A1Q96A83 441 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 MCRS1Q96EZ8 462 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 MYOCQ99972 504 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.11□□□□□ -0.95
PBRM1-208ENST00000410007 NOCTQ9UK39 431 aaKnown RBP9.11□□□□□ -0.95
PBRM1-208ENST00000410007 PEAK1Q9H792 1746 aa9.11□□□□□ -0.95
PBRM1-208ENST00000410007 PRR23D1E9PI22 279 aaPredicted RBP9.1□□□□□ -0.95
PBRM1-208ENST00000410007 ATG13O75143 517 aa9.1□□□□□ -0.95
PBRM1-208ENST00000410007 CBX6O95503 412 aa9.1□□□□□ -0.95
PBRM1-208ENST00000410007 KRT75O95678 551 aa9.1□□□□□ -0.95
PBRM1-208ENST00000410007 PRR23D2P0DMB1 279 aaPredicted RBP9.1□□□□□ -0.95
PBRM1-208ENST00000410007 HGFP14210 728 aa9.1□□□□□ -0.95
PBRM1-208ENST00000410007 PAICSP22234 425 aaKnown RBP9.1□□□□□ -0.95
PBRM1-208ENST00000410007 JAK1P23458 1154 aa9.1□□□□□ -0.95
PBRM1-208ENST00000410007 SLC34A1Q06495 639 aa9.1□□□□□ -0.95
PBRM1-208ENST00000410007 TIGD5Q53EQ6 642 aa9.1□□□□□ -0.95
PBRM1-208ENST00000410007 RHBDF2Q6PJF5 856 aa9.1□□□□□ -0.95
PBRM1-208ENST00000410007 CRTC3Q6UUV7 619 aa9.1□□□□□ -0.95
PBRM1-208ENST00000410007 CYP2R1Q6VVX0 501 aa9.1□□□□□ -0.95
PBRM1-208ENST00000410007 CEP68Q76N32 757 aa9.1□□□□□ -0.95
PBRM1-208ENST00000410007 FAM124AQ86V42 546 aa9.1□□□□□ -0.95
PBRM1-208ENST00000410007 ZDHHC13Q8IUH4 622 aa9.1□□□□□ -0.95
PBRM1-208ENST00000410007 ARL14EPQ8N8R7 260 aaPredicted RBP9.1□□□□□ -0.95
PBRM1-208ENST00000410007 GMLQ99445 158 aa9.1□□□□□ -0.95
PBRM1-208ENST00000410007 TMEM79Q9BSE2 394 aa9.1□□□□□ -0.95
PBRM1-208ENST00000410007 TBCDQ9BTW9 1192 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms