RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 KAT2AQ92830 837 aa4.65□□□□□ -1.67
CLK1-203ENST00000409769 RIOK1Q9BRS2 568 aaKnown RBP4.65□□□□□ -1.67
CLK1-203ENST00000409769 ARHGAP39Q9C0H5 1083 aa4.65□□□□□ -1.67
CLK1-203ENST00000409769 SEPSECSQ9HD40 501 aaKnown RBP4.65□□□□□ -1.67
CLK1-203ENST00000409769 RNF146Q9NTX7 359 aa4.65□□□□□ -1.67
CLK1-203ENST00000409769 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.65□□□□□ -1.67
CLK1-203ENST00000409769 SLC8A2Q9UPR5 921 aa4.65□□□□□ -1.67
CLK1-203ENST00000409769 SIPA1L1O43166 1804 aa4.65□□□□□ -1.67
CLK1-203ENST00000409769 UTRNP46939 3433 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.64□□□□□ -1.67
CLK1-203ENST00000409769 TMEM247A6NEH6 219 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 GAGE12JA6NER3 117 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 NPIPB13A6NJU9 1138 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 SAC3D1A6NKF1 404 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 NPIPB5A8MRT5 1133 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 NPIPB4C9JG80 1138 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 RHODO00212 210 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 SPTLC2O15270 562 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 IRAK2O43187 625 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 GPAA1O43292 621 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 NBNO60934 754 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 FRAT2O75474 233 aaPredicted RBP4.64□□□□□ -1.67
CLK1-203ENST00000409769 EPN2O95208 641 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 HSPD1P10809 573 aaKnown RBP4.64□□□□□ -1.67
CLK1-203ENST00000409769 PKMP14618 531 aaKnown RBP4.64□□□□□ -1.67
CLK1-203ENST00000409769 TNFRSF1BP20333 461 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 PNPLA4P41247 253 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 AARSP49588 968 aaKnown RBP eCLIP4.64□□□□□ -1.67
CLK1-203ENST00000409769 THOC5Q13769 683 aaKnown RBP4.64□□□□□ -1.67
CLK1-203ENST00000409769 NECTIN1Q15223 517 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 INPP5JQ15735 1006 aaPredicted RBP4.64□□□□□ -1.67
CLK1-203ENST00000409769 TIGD6Q17RP2 521 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 SMTNL2Q2TAL5 461 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 ADCK5Q3MIX3 580 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 NAA16Q6N069 864 aaPredicted RBP4.64□□□□□ -1.67
CLK1-203ENST00000409769 CYB5R4Q7L1T6 521 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 KDELC2Q7Z4H8 507 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 HERC6Q8IVU3 1022 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 RUBCNQ92622 972 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 SLC25A28Q96A46 364 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 TBC1D20Q96BZ9 403 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 ZPBPQ9BS86 351 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 MXD3Q9BW11 206 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 TASP1Q9H6P5 420 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 MRPL44Q9H9J2 332 aaKnown RBP4.64□□□□□ -1.67
CLK1-203ENST00000409769 TMEM248Q9NWD8 314 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 RAI14Q9P0K7 980 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 UTS2RQ9UKP6 389 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 ZMYM6O95789 1325 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 MYO3BQ8WXR4 1341 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 MYH8P13535 1937 aa4.64□□□□□ -1.67
CLK1-203ENST00000409769 RPAP1Q9BWH6 1393 aaPredicted RBP4.64□□□□□ -1.67
CLK1-203ENST00000409769 GPR75-ASB3A0A0A6YYF3 556 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 PSMD14O00487 310 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 MSI1O43347 362 aaKnown RBP4.63□□□□□ -1.67
CLK1-203ENST00000409769 ZC3H11AO75152 810 aaKnown RBP eCLIP4.63□□□□□ -1.671e-16■■■□□ 18.6
CLK1-203ENST00000409769 NFATC1O95644 943 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 IFNA2P01563 188 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 ACP5P13686 325 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 TNNT1P13805 278 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 HALP42357 657 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 RPS6KA3P51812 740 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 GSTO1P78417 241 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 ZXDBP98169 803 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 ZBTB16Q05516 673 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 CXCL9Q07325 125 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 CUL4BQ13620 913 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 ALX1Q15699 326 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 PRTGQ2VWP7 1150 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 FBXO47Q5MNV8 452 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 AADACL2Q6P093 401 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 MTFR2Q6P444 385 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 SLC30A9Q6PML9 568 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 B4GALNT4Q76KP1 1039 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 SYT13Q7L8C5 426 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 GALNT7Q86SF2 657 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 DZIP1Q86YF9 867 aaKnown RBP4.63□□□□□ -1.67
CLK1-203ENST00000409769 SCN4BQ8IWT1 228 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 CENPIQ92674 756 aaPredicted RBP4.63□□□□□ -1.67
CLK1-203ENST00000409769 FRG2BQ96QU4 278 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 FAM167BQ9BTA0 163 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 FRMD8Q9BZ67 464 aaPredicted RBP4.63□□□□□ -1.67
CLK1-203ENST00000409769 FZD3Q9NPG1 666 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 AATFQ9NY61 560 aaKnown RBP eCLIP4.63□□□□□ -1.67
CLK1-203ENST00000409769 PROCRQ9UNN8 238 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 MORC2Q9Y6X9 1032 aaPredicted RBP4.63□□□□□ -1.67
CLK1-203ENST00000409769 MROH7-TTC4A0A0A0MT08 1334 aa4.63□□□□□ -1.67
CLK1-203ENST00000409769 GREB1LQ9C091 1923 aaPredicted RBP4.62□□□□□ -1.67
CLK1-203ENST00000409769 C4orf47A7E2U8 309 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 B9A039 149 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 GTPBP1O00178 669 aaKnown RBP4.62□□□□□ -1.67
CLK1-203ENST00000409769 PRKAB2O43741 272 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 EIF3JO75822 258 aaKnown RBP4.62□□□□□ -1.67
CLK1-203ENST00000409769 MBD4O95243 580 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 LDHCP07864 332 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 BTDP43251 543 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 RGS19P49795 217 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 RBM5P52756 815 aaKnown RBP eCLIP4.62□□□□□ -1.67
CLK1-203ENST00000409769 DYNLL1P63167 89 aaKnown RBP4.62□□□□□ -1.67
CLK1-203ENST00000409769 GALNT3Q14435 633 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms