RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 NFS1Q9Y697 457 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 TRPM6Q9BX84 2022 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 CPED1A4D0V7 1026 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 GOLGA6L10A6NI86 522 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 K7ENP7 123 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 EIF3HO15372 352 aaKnown RBP eCLIP12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 EFSO43281 561 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 ATMINO43313 823 aaPredicted RBP12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 SPOPO43791 374 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 LZTS3O60299 673 aaPredicted RBP12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 PPFIA2O75334 1257 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 GRAP2O75791 330 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 PCDH8O95206 1070 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 KRT14P02533 472 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 CYP1A1P04798 512 aaPredicted RBP12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 ALPPL2P10696 532 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 MARCKSL1P49006 195 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 RWDD2BP57060 319 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 KCNC4Q03721 635 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 ZNF177Q13360 481 aaPredicted RBP12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 ALFQ53S48 1182 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 ARSIQ5FYB1 569 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 PERM1Q5SV97 790 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 TTC39BQ5VTQ0 682 aaPredicted RBP12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 NAA35Q5VZE5 725 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 NEK5Q6P3R8 708 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 INO80CQ6PI98 192 aaPredicted RBP12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 EFL1Q7Z2Z2 1120 aaKnown RBP12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 MCOLN2Q8IZK6 566 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 PRELID2Q8N945 189 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 ZNF548Q8NEK5 533 aaPredicted RBP12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 TMIEQ8NEW7 156 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 STK32AQ8WU08 396 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 ZNF606Q8WXB4 792 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 MED8Q96G25 268 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 SLC2A13Q96QE2 648 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 TRIM51Q9BSJ1 452 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 TXLNGYQ9BZA5 131 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 TNKS2Q9H2K2 1166 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 DDIT4Q9NX09 232 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 SLC12A6Q9UHW9 1150 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 HS3ST2Q9Y278 367 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 TBC1D30Q9Y2I9 924 aa12.88□□□□□ -0.35
CHRNA1-205ENST00000409542 CDRT15L2A8MXV6 281 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 I6L893 689 aaPredicted RBP12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 SPINT1O43278 529 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 SLC28A2O43868 658 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 ZNF821O75541 412 aaPredicted RBP12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 ENDOD1O94919 500 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 WISP1O95388 367 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 PAK4O96013 591 aaPredicted RBP12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 CCR1P32246 355 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 SLC1A1P43005 524 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 FNTAP49354 379 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 DUSP3P51452 185 aaPredicted RBP12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 OXCT1P55809 520 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 GNGT1P63211 74 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 DEFB133Q30KQ1 61 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 C5orf22Q49AR2 442 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 CEP85LQ5SZL2 805 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 ARTNQ5T4W7 220 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 AGBL2Q5U5Z8 902 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 IGF2-ASQ6U949 168 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 LINGO4Q6UY18 593 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 ERN2Q76MJ5 926 aaKnown RBP12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 PTAR1Q7Z6K3 402 aaPredicted RBP12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 SLC13A5Q86YT5 568 aaPredicted RBP12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 EXD3Q8N9H8 876 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 ATP11CQ8NB49 1132 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 RNF34Q969K3 372 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 IFT43Q96FT9 208 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 FMO2Q99518 471 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 SIK2Q9H0K1 926 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 DPH5Q9H2P9 285 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 TCEAL2Q9H3H9 227 aaPredicted RBP12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 ZDHHC18Q9NUE0 388 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 VPS51Q9UID3 782 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 PNMA8BQ9ULN7 279 aaPredicted RBP12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 HS3ST3A1Q9Y663 406 aa12.87□□□□□ -0.35
CHRNA1-205ENST00000409542 BSNQ9UPA5 3926 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 A0A0D9SEW6 157 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 NEMP2A6NFY4 417 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 PAGE1O75459 146 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 LEFTY1O75610 366 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 CSF2P04141 144 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 MYZAPP0CAP1 466 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 PYGMP11217 842 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 TFE3P19532 575 aaPredicted RBP12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 NR1D1P20393 614 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 RBMS1P29558 406 aaKnown RBP12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 PDX1P52945 283 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 EIF3BP55884 814 aaKnown RBP12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 HNRNPKP61978 463 aaKnown RBP eCLIP12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 ZNF844Q08AG5 666 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 PTP4A2Q12974 167 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 NME3Q13232 169 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 SRSF6Q13247 344 aaKnown RBP12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 CLN3Q13286 438 aa12.86□□□□□ -0.35
CHRNA1-205ENST00000409542 PDCLQ13371 301 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms