RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 C4orf17Q53FE4 359 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 EFHC2Q5JST6 749 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 FOXR1Q6PIV2 292 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 LVRNQ6Q4G3 990 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 HID1Q8IV36 788 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 UMODL1-AS1Q8N2C9 162 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 SDR16C5Q8N3Y7 309 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 FSTL5Q8N475 847 aaPredicted RBP9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 ARL14Q8N4G2 192 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 WDR36Q8NI36 951 aaKnown RBP9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 SNRNP27Q8WVK2 155 aaKnown RBP9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 SCG3Q8WXD2 468 aaKnown RBP9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 TSACCQ96A04 125 aaPredicted RBP9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 NCAPGQ9BPX3 1015 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 SUV39H2Q9H5I1 410 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 CATSPERBQ9H7T0 1116 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 GULP1Q9UBP9 304 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 LHX3Q9UBR4 397 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 FZD10Q9ULW2 581 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 DOLKQ9UPQ8 538 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 SIK3Q9Y2K2 1263 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 COQ6Q9Y2Z9 468 aa9.25□□□□□ -0.93
NIF3L1-203ENST00000409129 SCN8AQ9UQD0 1980 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 LRRK1Q38SD2 2015 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 CCDC187A0A096LP49 1063 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 TCRBV5S1A1TA0A578 114 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 TSPAN11A1L157 253 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 PMS2P1A4D2B8 440 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 ANKRD62A6NC57 917 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 K7ENP7 123 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 NTN3O00634 580 aaPredicted RBP9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 BUB1BO60566 1050 aaPredicted RBP9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 TNFSF15O95150 251 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 RASGRP1O95267 797 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 PIGNO95427 931 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 CELA2BP08218 269 aaPredicted RBP9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 ALPIP09923 528 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 HTR1BP28222 390 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 AIF1P55008 147 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 SRP54P61011 504 aaKnown RBP9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 RPL7AP62424 266 aaKnown RBP9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 SPIDRQ14159 915 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 INPP5AQ14642 412 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 NFATC4Q14934 902 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 AGERQ15109 404 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 SYCP1Q15431 976 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 UGP2Q16851 508 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 ALG11Q2TAA5 492 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 LINC00303Q3SY05 128 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 DNAJC24Q6P3W2 148 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 INO80CQ6PI98 192 aaPredicted RBP9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 ENPP7Q6UWV6 458 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 ATG14Q6ZNE5 492 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 MON1BQ7L1V2 547 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 RD3Q7Z3Z2 195 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 CLEC14AQ86T13 490 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 GKN2Q86XP6 184 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 DNAAF5Q86Y56 855 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 ARL10Q8N8L6 244 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 NEK11Q8NG66 645 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 EXOC2Q96KP1 924 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 PCMTD1Q96MG8 357 aaPredicted RBP9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 ZNF641Q96N77 438 aaPredicted RBP9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 AGPAT1Q99943 283 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 CNPY3Q9BT09 278 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 APOOQ9BUR5 198 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 EDEM3Q9BZQ6 932 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 PCDH12Q9NPG4 1184 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 SEPT11Q9NVA2 429 aaKnown RBP9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 FANCLQ9NW38 375 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 DONSONQ9NYP3 566 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 UBA2Q9UBT2 640 aaPredicted RBP9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 GPR34Q9UPC5 381 aa9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 SPENQ96T58 3664 aaKnown RBP9.24□□□□□ -0.93
NIF3L1-203ENST00000409129 TMX2-CTNND1H3BSU7 103 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 J3KR12 359 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 FGF10O15520 208 aaPredicted RBP9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 SUV39H1O43463 412 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 TNFP01375 233 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 ITGA2BP08514 1039 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 CR2P20023 1033 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 HTR7P34969 479 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 LIG3P49916 1009 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 NDST2P52849 883 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 PDX1P52945 283 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 COPB1P53618 953 aaKnown RBP9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 CCL7P80098 99 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 SRSF6Q13247 344 aaKnown RBP9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 ERAP2Q6P179 960 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 BRAT1Q6PJG6 821 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 KYQ8NBH2 561 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 OR6C4Q8NGE1 309 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 ATL2Q8NHH9 583 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 PCDH19Q8TAB3 1148 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 CCDC74AQ96AQ1 378 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 LIN37Q96GY3 246 aaPredicted RBP9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 MCEEQ96PE7 176 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 GFM1Q96RP9 751 aaKnown RBP9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 LRRC19Q9H756 370 aa9.23□□□□□ -0.93
NIF3L1-203ENST00000409129 SYNDIG1Q9H7V2 258 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms