RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 MRNIPQ6NTE8 343 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 CMTM8Q8IZV2 173 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 GPR150Q8NGU9 434 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 FIBINQ8TAL6 211 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 TCEAL4Q96EI5 215 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 C20orf27Q9GZN8 174 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 SUDS3Q9H7L9 328 aaPredicted RBP19.04■□□□□ 0.64
USP39-202ENST00000409025 NLE1Q9NVX2 485 aaPredicted RBP19.04■□□□□ 0.64
USP39-202ENST00000409025 KCNK4Q9NYG8 393 aa19.04■□□□□ 0.64
USP39-202ENST00000409025 MARCH4Q9P2E8 410 aaPredicted RBP19.04■□□□□ 0.64
USP39-202ENST00000409025 CCDC162PA2VCL2 907 aa19.03■□□□□ 0.64
USP39-202ENST00000409025 S1PR4O95977 384 aa19.03■□□□□ 0.64
USP39-202ENST00000409025 MYL2P10916 166 aa19.03■□□□□ 0.64
USP39-202ENST00000409025 HOXA9P31269 272 aa19.03■□□□□ 0.64
USP39-202ENST00000409025 PGGT1BP53609 377 aa19.03■□□□□ 0.64
USP39-202ENST00000409025 LMAN2Q12907 356 aa19.03■□□□□ 0.64
USP39-202ENST00000409025 TRAF2Q12933 501 aa19.03■□□□□ 0.64
USP39-202ENST00000409025 ITGA9Q13797 1035 aa19.03■□□□□ 0.64
USP39-202ENST00000409025 ZNF460Q14592 562 aa19.03■□□□□ 0.64
USP39-202ENST00000409025 TEAD2Q15562 447 aa19.03■□□□□ 0.64
USP39-202ENST00000409025 TSNAXIP1Q2TAA8 658 aa19.03■□□□□ 0.64
USP39-202ENST00000409025 RBM20Q5T481 1227 aaKnown RBP19.03■□□□□ 0.64
USP39-202ENST00000409025 CENPLQ8N0S6 344 aaPredicted RBP19.03■□□□□ 0.64
USP39-202ENST00000409025 PPP4R1Q8TF05 950 aa19.03■□□□□ 0.64
USP39-202ENST00000409025 PDCD6IPQ8WUM4 868 aaKnown RBP19.03■□□□□ 0.64
USP39-202ENST00000409025 NDNQ99608 321 aa19.03■□□□□ 0.64
USP39-202ENST00000409025 ECT2Q9H8V3 914 aa19.03■□□□□ 0.64
USP39-202ENST00000409025 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.03■□□□□ 0.64
USP39-202ENST00000409025 ANKRD36A6QL64 1941 aa19.03■□□□□ 0.64
USP39-202ENST00000409025 ANKRD66B4E2M5 251 aa19.02■□□□□ 0.64
USP39-202ENST00000409025 ITM2AO43736 263 aa19.02■□□□□ 0.64
USP39-202ENST00000409025 H2AFYO75367 372 aaKnown RBP19.02■□□□□ 0.64
USP39-202ENST00000409025 KLHL2O95198 593 aa19.02■□□□□ 0.64
USP39-202ENST00000409025 RB1P06400 928 aa19.02■□□□□ 0.64
USP39-202ENST00000409025 RHOP08100 348 aa19.02■□□□□ 0.64
USP39-202ENST00000409025 IRS1P35568 1242 aa19.02■□□□□ 0.64
USP39-202ENST00000409025 KPNA2P52292 529 aaKnown RBP19.02■□□□□ 0.64
USP39-202ENST00000409025 ZNF140P52738 457 aaPredicted RBP19.02■□□□□ 0.64
USP39-202ENST00000409025 SDCCAG8Q86SQ7 713 aaPredicted RBP19.02■□□□□ 0.64
USP39-202ENST00000409025 TBC1D1Q86TI0 1168 aaPredicted RBP19.02■□□□□ 0.64
USP39-202ENST00000409025 LDB1Q86U70 411 aaPredicted RBP19.02■□□□□ 0.64
USP39-202ENST00000409025 LEMD2Q8NC56 503 aa19.02■□□□□ 0.64
USP39-202ENST00000409025 OR4L1Q8NH43 312 aa19.02■□□□□ 0.64
USP39-202ENST00000409025 TTC8Q8TAM2 541 aa19.02■□□□□ 0.64
USP39-202ENST00000409025 CDKN2AIPNLQ96HQ2 116 aa19.02■□□□□ 0.64
USP39-202ENST00000409025 CATSPERZQ9NTU4 200 aa19.02■□□□□ 0.64
USP39-202ENST00000409025 CPSF2Q9P2I0 782 aaKnown RBP19.02■□□□□ 0.64
USP39-202ENST00000409025 HEY2Q9UBP5 337 aa19.02■□□□□ 0.64
USP39-202ENST00000409025 ZFP69BQ9UJL9 534 aa19.02■□□□□ 0.64
USP39-202ENST00000409025 GRM6O15303 877 aa19.02■□□□□ 0.63
USP39-202ENST00000409025 TRIM13O60858 407 aa19.02■□□□□ 0.63
USP39-202ENST00000409025 CLASP2O75122 1294 aaKnown RBP19.02■□□□□ 0.63
USP39-202ENST00000409025 XYLBO75191 536 aa19.02■□□□□ 0.63
USP39-202ENST00000409025 MT-CO1P00395 513 aa19.02■□□□□ 0.63
USP39-202ENST00000409025 HNRNPA1P09651 372 aaKnown RBP eCLIP19.02■□□□□ 0.63
USP39-202ENST00000409025 KITP10721 976 aa19.02■□□□□ 0.63
USP39-202ENST00000409025 OGNP20774 298 aaKnown RBP19.02■□□□□ 0.63
USP39-202ENST00000409025 ABCE1P61221 599 aaKnown RBP19.02■□□□□ 0.63
USP39-202ENST00000409025 AP1S1P61966 158 aa19.02■□□□□ 0.63
USP39-202ENST00000409025 ATXN7L2Q5T6C5 722 aaPredicted RBP19.02■□□□□ 0.63
USP39-202ENST00000409025 HECTD2Q5U5R9 776 aa19.02■□□□□ 0.63
USP39-202ENST00000409025 LRRC8EQ6NSJ5 796 aa19.02■□□□□ 0.63
USP39-202ENST00000409025 ZYG11AQ6WRX3 759 aa19.02■□□□□ 0.63
USP39-202ENST00000409025 METTL3Q86U44 580 aaKnown RBP19.02■□□□□ 0.63
USP39-202ENST00000409025 MTDHQ86UE4 582 aaKnown RBP19.02■□□□□ 0.63
USP39-202ENST00000409025 MDGA1Q8NFP4 955 aa19.02■□□□□ 0.63
USP39-202ENST00000409025 USP13Q92995 863 aaPredicted RBP19.02■□□□□ 0.63
USP39-202ENST00000409025 NXNL1Q96CM4 212 aa19.02■□□□□ 0.63
USP39-202ENST00000409025 LBHD1Q9BQE6 289 aaPredicted RBP19.02■□□□□ 0.63
USP39-202ENST00000409025 CLEC4EQ9ULY5 219 aa19.02■□□□□ 0.63
USP39-202ENST00000409025 CCL26Q9Y258 94 aa19.02■□□□□ 0.63
USP39-202ENST00000409025 MKI67P46013 3256 aaKnown RBP19.01■□□□□ 0.63
USP39-202ENST00000409025 SOBPA7XYQ1 873 aa19.01■□□□□ 0.63
USP39-202ENST00000409025 MOSPD3O75425 235 aa19.01■□□□□ 0.63
USP39-202ENST00000409025 LYPLA1O75608 230 aaPredicted RBP19.01■□□□□ 0.63
USP39-202ENST00000409025 EPCAMP16422 314 aa19.01■□□□□ 0.63
USP39-202ENST00000409025 LPOP22079 712 aaPredicted RBP19.01■□□□□ 0.63
USP39-202ENST00000409025 GLRBP48167 497 aa19.01■□□□□ 0.63
USP39-202ENST00000409025 NCALDP61601 193 aa19.01■□□□□ 0.63
USP39-202ENST00000409025 ZBTB16Q05516 673 aa19.01■□□□□ 0.63
USP39-202ENST00000409025 PLEKHG6Q3KR16 790 aa19.01■□□□□ 0.63
USP39-202ENST00000409025 SPDYAQ5MJ70 313 aa19.01■□□□□ 0.63
USP39-202ENST00000409025 WDR75Q8IWA0 830 aaKnown RBP19.01■□□□□ 0.63
USP39-202ENST00000409025 FSTL5Q8N475 847 aaPredicted RBP19.01■□□□□ 0.63
USP39-202ENST00000409025 OR4K2Q8NGD2 314 aa19.01■□□□□ 0.63
USP39-202ENST00000409025 OR6Y1Q8NGX8 325 aa19.01■□□□□ 0.63
USP39-202ENST00000409025 PIWIL2Q8TC59 973 aaKnown RBP19.01■□□□□ 0.63
USP39-202ENST00000409025 SCG3Q8WXD2 468 aaKnown RBP19.01■□□□□ 0.63
USP39-202ENST00000409025 OLFM1Q99784 485 aa19.01■□□□□ 0.63
USP39-202ENST00000409025 SIKE1Q9BRV8 207 aa19.01■□□□□ 0.63
USP39-202ENST00000409025 TXLNGQ9NUQ3 528 aa19.01■□□□□ 0.63
USP39-202ENST00000409025 OXSMQ9NWU1 459 aa19.01■□□□□ 0.63
USP39-202ENST00000409025 MARCOQ9UEW3 520 aaPredicted RBP19.01■□□□□ 0.63
USP39-202ENST00000409025 CORO1CQ9ULV4 474 aaPredicted RBP19.01■□□□□ 0.63
USP39-202ENST00000409025 VWA7Q9Y334 891 aa19.01■□□□□ 0.63
USP39-202ENST00000409025 TMEM114B3SHH9 223 aa19■□□□□ 0.63
USP39-202ENST00000409025 K7ERQ8 282 aa19■□□□□ 0.63
USP39-202ENST00000409025 ATP5HO75947 161 aa19■□□□□ 0.63
USP39-202ENST00000409025 SLC8A1P32418 973 aa19■□□□□ 0.63
USP39-202ENST00000409025 CD70P32970 193 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms