RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 CABIN1Q9Y6J0 2220 aa12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 TEX51A0A1B0GUA7 166 aa12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 DDX3XO00571 662 aaKnown RBP eCLIP12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 RAD51BO15315 384 aa12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 USP12O75317 370 aa12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 CSO75390 466 aaKnown RBP12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 PIGNO95427 931 aa12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 TEAD1P28347 426 aa12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 GKP32189 559 aa12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 MMP13P45452 471 aa12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 TMPRSS3P57727 454 aa12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 SRP54P61011 504 aaKnown RBP12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 DPYSQ14117 519 aa12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 FGL2Q14314 439 aa12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 ACOX1Q15067 660 aa12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 IFI16Q16666 785 aaKnown RBP12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 COL28A1Q2UY09 1125 aa12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 DEFB133Q30KQ1 61 aa12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 TSEN2Q8NCE0 465 aaKnown RBP12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 PDCD6IPQ8WUM4 868 aaKnown RBP12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 FATE1Q969F0 183 aa12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 KCTD15Q96SI1 283 aaPredicted RBP12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 ZNF670Q9BS34 389 aa12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 GSDMCQ9BYG8 508 aa12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 CWC15Q9P013 229 aaKnown RBP12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 ITM2BQ9Y287 266 aa12.92□□□□□ -0.34
SNORD88B-201ENST00000408454 FAM208BQ5VWN6 2430 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 CCDC187A0A096LP49 1063 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 SYCE3A1L190 88 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 J3KR12 359 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 ATMINO43313 823 aaPredicted RBP12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 BRINP1O60477 761 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 RECQL5O94762 991 aaPredicted RBP12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 PCCBP05166 539 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 MYCLP1P12525 358 aaPredicted RBP12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 SLC2A4P14672 509 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 ZFXP17010 805 aaPredicted RBP12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 VIPR1P32241 457 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 NOP2P46087 812 aaKnown RBP12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 GABREP78334 506 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 INPP5AQ14642 412 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 IQCB1Q15051 598 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 CDKN3Q16667 212 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 ISXQ2M1V0 245 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 ZNF542PQ5EBM4 170 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 ARTNQ5T4W7 220 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 TMEM164Q5U3C3 297 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 CDCP2Q5VXM1 449 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 POLNQ7Z5Q5 900 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 VSIG1Q86XK7 387 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 CAMK1DQ8IU85 385 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 RHOT2Q8IXI1 618 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 KCTD6Q8NC69 237 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 CCDC112Q8NEF3 446 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 HNRNPLLQ8WVV9 542 aaKnown RBP12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 NUS1Q96E22 293 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 CSPG4P5Q96PW8 444 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 GFM1Q96RP9 751 aaKnown RBP12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 RBM15Q96T37 977 aaKnown RBP eCLIP12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 FERMT1Q9BQL6 677 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 MGME1Q9BQP7 344 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 LRRC61Q9BV99 259 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 NUP85Q9BW27 656 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 ADGRE3Q9BY15 652 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 BRD8Q9H0E9 1235 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 CDH19Q9H159 772 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 RAD18Q9NS91 495 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 GPATCH2LQ9NWQ4 482 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 TAS2R14Q9NYV8 317 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 CTTNBP2NLQ9P2B4 639 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 GPR34Q9UPC5 381 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 LAMA1P25391 3075 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 TRPM6Q9BX84 2022 aa12.91□□□□□ -0.34
SNORD88B-201ENST00000408454 CHD5Q8TDI0 1954 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 SSU72P8A0A1W2PR75 194 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 ZNF487B1APH4 448 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 TAF4O00268 1085 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 MUSKO15146 869 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 YY2O15391 372 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 INSIG1O15503 277 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 AKR1B10O60218 316 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 ZNF189O75820 626 aaPredicted RBP12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 CYP1A2P05177 515 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 GLB1P16278 677 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 MAN1A1P33908 653 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 OGDHQ02218 1023 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 ITKQ08881 620 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 EIF2B5Q13144 721 aaKnown RBP12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 WSCD2Q2TBF2 565 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 RAB6CQ53S08 254 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 SPECC1LQ69YQ0 1117 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 CCDC70Q6NSX1 233 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 LIPIQ6XZB0 460 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 GPR155Q7Z3F1 870 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 RD3Q7Z3Z2 195 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 TAF8Q7Z7C8 310 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 OR8K1Q8NGG5 319 aa12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 ZNF564Q8TBZ8 553 aaPredicted RBP12.9□□□□□ -0.34
SNORD88B-201ENST00000408454 CCHCR1Q8TD31 782 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms