RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ACTN2P35609 894 aa9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 HK3P52790 923 aa9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 KIAA1024LP59773 190 aa9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 SLC10A7Q0GE19 358 aa9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 EIF2B5Q13144 721 aaKnown RBP9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 TARDBPQ13148 414 aaKnown RBP eCLIP9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 ARHGEF7Q14155 803 aa9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 RTP5Q14D33 572 aa9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 IFI16Q16666 785 aaKnown RBP9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 ZNF542PQ5EBM4 170 aa9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 C6orf132Q5T0Z8 1188 aa9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 ARMC12Q5T9G4 340 aa9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 LRRC69Q6ZNQ3 347 aa9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 RHOT2Q8IXI1 618 aa9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 KCTD6Q8NC69 237 aa9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 MDM1Q8TC05 714 aa9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 FAM71BQ8TC56 605 aa9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 MAPK15Q8TD08 544 aa9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 VOPP1Q96AW1 172 aa9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 APOOQ9BUR5 198 aa9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 WDR26Q9H7D7 661 aa9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 LUC7LQ9NQ29 371 aaKnown RBP9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 PHTF1Q9UMS5 762 aa9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 AK5Q9Y6K8 562 aa9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 ARID1BQ8NFD5 2236 aaPredicted RBP9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 APC2O95996 2303 aa9.13□□□□□ -0.95
SNORD88A-201ENST00000408314 PLXNB3Q9ULL4 1909 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 EME2A4GXA9 379 aaPredicted RBP9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 ZNF487B1APH4 448 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 TRAFD1O14545 582 aaPredicted RBP9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 TNFRSF10CO14798 259 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 ZW10O43264 779 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 HTRA2O43464 458 aaPredicted RBP9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 OPA1O60313 960 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 MAFKO60675 156 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 MFAP3LO75121 409 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 RECQL5O94762 991 aaPredicted RBP9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 TNFP01375 233 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 CAPNS1P04632 268 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 PCCBP05166 539 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 TSHRP16473 764 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 CR2P20023 1033 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 VIPR1P32241 457 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 GJC1P36383 396 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 GARSP41250 739 aaKnown RBP9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 ARHGAP25P42331 645 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 RGRP47804 291 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 SRP54P61011 504 aaKnown RBP9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 INSM1Q01101 510 aaPredicted RBP9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 CYP4F3Q08477 520 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 GALNT2Q10471 571 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 ACOX1Q15067 660 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 PAFAH1B3Q15102 231 aaKnown RBP9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 WSCD2Q2TBF2 565 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 ENPP7Q6UWV6 458 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 LIPIQ6XZB0 460 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 ARHGAP36Q6ZRI8 547 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 VSIG1Q86XK7 387 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 HID1Q8IV36 788 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 VSTM4Q8IW00 320 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 RAVER1Q8IY67 606 aaKnown RBP9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 ARL10Q8N8L6 244 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 NETO2Q8NC67 525 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 IFI44Q8TCB0 444 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 PDCD6IPQ8WUM4 868 aaKnown RBP9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 NUS1Q96E22 293 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 LRRC61Q9BV99 259 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 BOCQ9BWV1 1114 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 MBNL1Q9NR56 388 aaKnown RBP9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 PHPT1Q9NRX4 125 aaPredicted RBP9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 ABHD10Q9NUJ1 306 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 B4GALT6Q9UBX8 382 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 LHX6Q9UPM6 363 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 DGKBQ9Y6T7 804 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 CHD6Q8TD26 2715 aa9.12□□□□□ -0.95
SNORD88A-201ENST00000408314 CPED1A4D0V7 1026 aa9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 TMX2-CTNND1H3BSU7 103 aa9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 MUSKO15146 869 aa9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 GIMD1P0DJR0 217 aa9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 TCF4P15884 667 aa9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 ZFXP17010 805 aaPredicted RBP9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 ZNF30P17039 623 aa9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 CCNCP24863 283 aa9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 TEAD1P28347 426 aa9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 MLLT3P42568 568 aaPredicted RBP9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 ABCG1P45844 678 aa9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 EPHB1P54762 984 aa9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 ADKP55263 362 aaKnown RBP9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 RPL26P61254 145 aaKnown RBP9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 ITKQ08881 620 aa9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 RALGDSQ12967 914 aa9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 DPYSL3Q14195 570 aa9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 INPP5AQ14642 412 aa9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 ALG11Q2TAA5 492 aa9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 DEFB133Q30KQ1 61 aa9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 CDCP2Q5VXM1 449 aa9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 KDM7AQ6ZMT4 941 aa9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 EFL1Q7Z2Z2 1120 aaKnown RBP9.11□□□□□ -0.95
SNORD88A-201ENST00000408314 ZSWIM9Q86XI8 627 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms