RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 MUS81Q96NY9 551 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 THUMPD3Q9BV44 507 aaKnown RBP9.11□□□□□ -0.95
PSEN1-205ENST00000406768 SOX17Q9H6I2 414 aaPredicted RBP9.11□□□□□ -0.95
PSEN1-205ENST00000406768 LRRC40Q9H9A6 602 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 RDH8Q9NYR8 311 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 NOCTQ9UK39 431 aaKnown RBP9.11□□□□□ -0.95
PSEN1-205ENST00000406768 PCDHA11Q9Y5I1 949 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 TYW5A2RUC4 315 aaKnown RBP9.11□□□□□ -0.95
PSEN1-205ENST00000406768 HOXC11O43248 304 aaPredicted RBP9.11□□□□□ -0.95
PSEN1-205ENST00000406768 RECQL5O94762 991 aaPredicted RBP9.11□□□□□ -0.95
PSEN1-205ENST00000406768 ATG7O95352 703 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 CCNYL3P0C7X3 344 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 ZNF806P0C7X5 589 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 PDGFRAP16234 1089 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 IL7RP16871 459 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 ZNF37AP17032 561 aaPredicted RBP9.11□□□□□ -0.95
PSEN1-205ENST00000406768 RPL7AP62424 266 aaKnown RBP9.11□□□□□ -0.95
PSEN1-205ENST00000406768 RACK1P63244 317 aaKnown RBP9.11□□□□□ -0.95
PSEN1-205ENST00000406768 GCNT1Q02742 428 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 ARL13AQ5H913 290 aaPredicted RBP9.11□□□□□ -0.95
PSEN1-205ENST00000406768 SLX4IPQ5VYV7 408 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 ANKRD52Q8NB46 1076 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 KCNN1Q92952 543 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 CCDC126Q96EE4 140 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 FEM1AQ9BSK4 669 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 IKZF4Q9H2S9 585 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 VRTNQ9H8Y1 702 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 IPO11Q9UI26 975 aaKnown RBP9.11□□□□□ -0.95
PSEN1-205ENST00000406768 ADAM30Q9UKF2 790 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 A0A0G2JPF8 293 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 HNRNPCL3B7ZW38 293 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 G3V2T6 193 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 TMX2-CTNND1H3BSU7 103 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 AXIN1O15169 862 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 SNNO75324 88 aaPredicted RBP9.11□□□□□ -0.95
PSEN1-205ENST00000406768 CSH1P0DML2 217 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 CSH2P0DML3 217 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 HNRNPCL4P0DMR1 293 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 KDELR1P24390 212 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 PTPN9P43378 593 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 YWHAZP63104 245 aaKnown RBP9.11□□□□□ -0.95
PSEN1-205ENST00000406768 POU6F2P78424 691 aaPredicted RBP9.11□□□□□ -0.95
PSEN1-205ENST00000406768 TCEAL1Q15170 157 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 PPM1JQ5JR12 505 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 ATAD3CQ5T2N8 411 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 FAM45BPQ6NSW5 357 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 TRIM48Q8IWZ4 208 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 PM20D2Q8IYS1 436 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 PJA1Q8NG27 643 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 GTF2H4Q92759 462 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 GATA5Q9BWX5 397 aaPredicted RBP9.11□□□□□ -0.95
PSEN1-205ENST00000406768 UCK2Q9BZX2 261 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 SLC6A15Q9H2J7 730 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 CAB39LQ9H9S4 337 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 SNX15Q9NRS6 342 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 LIMD1Q9UGP4 676 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 SFMBT1Q9UHJ3 866 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 ZNF222Q9UK12 451 aa9.11□□□□□ -0.95
PSEN1-205ENST00000406768 FAM240BA0A1B0GVZ2 78 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 ZBTB14O43829 449 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 SLITRK3O94933 977 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 SNRPFP62306 86 aaKnown RBP9.1□□□□□ -0.95
PSEN1-205ENST00000406768 TFAMQ00059 246 aaKnown RBP9.1□□□□□ -0.95
PSEN1-205ENST00000406768 CUL2Q13617 745 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 LRIT3Q3SXY7 679 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 ESCO2Q56NI9 601 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 KIAA1841Q6NSI8 718 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 ADHFE1Q8IWW8 467 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 MIER2Q8N344 545 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 ATG16L2Q8NAA4 619 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 PIK3C3Q8NEB9 887 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 SHKBP1Q8TBC3 707 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 DEDD2Q8WXF8 326 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 PEX13Q92968 403 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 KREMEN1Q96MU8 473 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 NECTIN3Q9NQS3 549 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 TOPORSQ9NS56 1045 aaPredicted RBP9.1□□□□□ -0.95
PSEN1-205ENST00000406768 DNAJC11Q9NVH1 559 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 IMPAD1Q9NX62 359 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 ENPP5Q9UJA9 477 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 GMPPBQ9Y5P6 360 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 PARP4Q9UKK3 1724 aaKnown RBP9.1□□□□□ -0.95
PSEN1-205ENST00000406768 COL14A1Q05707 1796 aaKnown RBP9.1□□□□□ -0.95
PSEN1-205ENST00000406768 SYNJ2BP-COX16A0A087WUM0 186 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 CXorf49A8MYA2 514 aaPredicted RBP9.1□□□□□ -0.95
PSEN1-205ENST00000406768 H3BUI4 141 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 C7P10643 843 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 PAMP19021 973 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 GSTM2P28161 218 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 OSTNP61366 133 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 VPS72Q15906 364 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 RFX4Q33E94 735 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 HYIQ5T013 277 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 INTS11Q5TA45 600 aaKnown RBP9.1□□□□□ -0.95
PSEN1-205ENST00000406768 ZNF57Q68EA5 555 aaPredicted RBP9.1□□□□□ -0.95
PSEN1-205ENST00000406768 RNF111Q6ZNA4 994 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 ZNF598Q86UK7 904 aaKnown RBP9.1□□□□□ -0.95
PSEN1-205ENST00000406768 CACTIN-AS1Q8N1I8 211 aa9.1□□□□□ -0.95
PSEN1-205ENST00000406768 NARS2Q96I59 477 aaKnown RBP9.1□□□□□ -0.95
PSEN1-205ENST00000406768 ELMO2Q96JJ3 720 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms