RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 UBE2OQ9C0C9 1292 aaKnown RBP9.9□□□□□ -0.83
MSH2-202ENST00000406134 ZCWPW1Q9H0M4 648 aa9.9□□□□□ -0.83
MSH2-202ENST00000406134 TUBB1Q9H4B7 451 aa9.9□□□□□ -0.83
MSH2-202ENST00000406134 ZNF696Q9H7X3 374 aa9.9□□□□□ -0.83
MSH2-202ENST00000406134 LRRC14BA6NHZ5 514 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 H3BMM5 538 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 INPPL1O15357 1258 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 IPO13O94829 963 aaKnown RBP9.89□□□□□ -0.83
MSH2-202ENST00000406134 CD52P31358 61 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 HTR7P34969 479 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 MLLT6P55198 1093 aaPredicted RBP9.89□□□□□ -0.83
MSH2-202ENST00000406134 FOXA1P55317 472 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 POLE2P56282 527 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 COG7P83436 770 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 DSC2Q02487 901 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 GALNT1Q10472 559 aaPredicted RBP9.89□□□□□ -0.83
MSH2-202ENST00000406134 PTPRCAPQ14761 206 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 PCSK7Q16549 785 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 GRAMD1BQ3KR37 738 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 UNC50Q53HI1 259 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 ZNF678Q5SXM1 525 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 HECTD2Q5U5R9 776 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 PTAR1Q7Z6K3 402 aaPredicted RBP9.89□□□□□ -0.83
MSH2-202ENST00000406134 TTC9BQ8N6N2 239 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 IGSF8Q969P0 613 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 GPATCH1Q9BRR8 931 aaKnown RBP9.89□□□□□ -0.83
MSH2-202ENST00000406134 KATNAL1Q9BW62 490 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 SLC25A51Q9H1U9 297 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 ABCC13Q9NSE7 274 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 LOC285095A0A1B0GVY8 99 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 VNN2O95498 520 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 GPX3P22352 226 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 NFKB2Q00653 900 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 UGP2Q16851 508 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 MS4A13Q5J8X5 152 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 SIRPB2Q5JXA9 342 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 SDHAF4Q5VUM1 108 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 CST9Q5W186 159 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 C17orf99Q6UX52 265 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 CXCL17Q6UXB2 119 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 KIAA0408Q6ZU52 694 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 SETD3Q86TU7 594 aaPredicted RBP9.89□□□□□ -0.83
MSH2-202ENST00000406134 ICA1LQ8NDH6 482 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 GRIN3AQ8TCU5 1115 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 TMA16Q96EY4 203 aaKnown RBP9.89□□□□□ -0.83
MSH2-202ENST00000406134 SUSD3Q96L08 255 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 C1orf74Q96LT6 269 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 ZNF597Q96LX8 424 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 SLC39A3Q9BRY0 314 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 NCKIPSDQ9NZQ3 722 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 MAP10Q9P2G4 905 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 PADI3Q9ULW8 664 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 PLOD2O00469 737 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 B3GAT3O94766 335 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 PRSS56P0CW18 603 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 CCDC166P0CW27 439 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 TSPAN8P19075 237 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 CCR1P32246 355 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 SUOXP51687 545 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 SH3BP2P78314 561 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 LPIN1Q14693 890 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 MAP3K21Q5TCX8 1036 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 ZFP1Q6P2D0 407 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 ADCY4Q8NFM4 1077 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 ITFG2Q969R8 447 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 GBP5Q96PP8 586 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 SLC29A1Q99808 456 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 DUS2Q9NX74 493 aaKnown RBP9.89□□□□□ -0.83
MSH2-202ENST00000406134 GIMAP2Q9UG22 337 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 IPO11Q9UI26 975 aaKnown RBP9.89□□□□□ -0.83
MSH2-202ENST00000406134 SLC4A7Q9Y6M7 1214 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 PLXNB3Q9ULL4 1909 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 CROCCQ5TZA2 2017 aa9.89□□□□□ -0.83
MSH2-202ENST00000406134 FXYD1O00168 92 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 TRIM38O00635 465 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 CFLARO15519 480 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 TCN1P20061 433 aaPredicted RBP9.88□□□□□ -0.83
MSH2-202ENST00000406134 FDXRP22570 491 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 CD86P42081 329 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 PSME3P61289 254 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 OR4D1Q15615 310 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 TRIM71Q2Q1W2 868 aaKnown RBP9.88□□□□□ -0.83
MSH2-202ENST00000406134 MYLK3Q32MK0 819 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 GPR158Q5T848 1215 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 MSANTD2Q6P1R3 559 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 SDCCAG8Q86SQ7 713 aaPredicted RBP9.88□□□□□ -0.83
MSH2-202ENST00000406134 LZTR1Q8N653 840 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 ZNF512Q96ME7 567 aaPredicted RBP9.88□□□□□ -0.83
MSH2-202ENST00000406134 SH3GL3Q99963 347 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 EFCAB1Q9HAE3 211 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 SP110Q9HB58 689 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 PDFQ9HBH1 243 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 TRPC7Q9HCX4 862 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 TMEM248Q9NWD8 314 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 HSFX1Q9UBD0 423 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 CNOT11Q9UKZ1 510 aaKnown RBP9.88□□□□□ -0.83
MSH2-202ENST00000406134 A0A0U1RQF3 1178 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 ASPDHA6ND91 283 aa9.88□□□□□ -0.83
MSH2-202ENST00000406134 SNUPNO95149 360 aaKnown RBP9.88□□□□□ -0.83
MSH2-202ENST00000406134 PAPSS2O95340 614 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms