RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 CATP04040 527 aaKnown RBP13.41□□□□□ -0.26
SNED1-205ENST00000405547 MFSD10Q14728 455 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 DRICH1Q6PGQ1 229 aaPredicted RBP13.41□□□□□ -0.26
SNED1-205ENST00000405547 RIOX2Q8IUF8 465 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 NLNQ9BYT8 704 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 LAMA4Q16363 1823 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 FGF1P05230 155 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 ATP5C1P36542 298 aaKnown RBP13.41□□□□□ -0.26
SNED1-205ENST00000405547 PTGIRP43119 386 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 FASTKD3Q14CZ7 662 aaKnown RBP13.41□□□□□ -0.26
SNED1-205ENST00000405547 PMF1Q6P1K2 205 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 CMC1Q7Z7K0 106 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 FLCNQ8NFG4 579 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 DNAJB4Q9UDY4 337 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.41□□□□□ -0.26
SNED1-205ENST00000405547 TIPRLO75663 272 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 ADORA2AP29274 412 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 CCT3P49368 545 aaKnown RBP13.4□□□□□ -0.26
SNED1-205ENST00000405547 BNC1Q01954 994 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 CAPSQ13938 189 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 CPT1BQ92523 772 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 SLC38A2Q96QD8 506 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 RBM4BQ9BQ04 359 aaKnown RBP13.4□□□□□ -0.26
SNED1-205ENST00000405547 RBM4Q9BWF3 364 aaKnown RBP13.4□□□□□ -0.26
SNED1-205ENST00000405547 CIPCQ9C0C6 399 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 TCRBV7S2A1N4TA0A589 114 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 LGALS2P05162 132 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 CES1P23141 567 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 TNFSF9P41273 254 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 RNASEH2BQ5TBB1 312 aaKnown RBP13.4□□□□□ -0.26
SNED1-205ENST00000405547 ANKS1BQ7Z6G8 1248 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 KLHL31Q9H511 634 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 FAM198AQ9UFP1 575 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 COG5Q9UP83 839 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 ENTPD4Q9Y227 616 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 MYH14Q7Z406 1995 aaKnown RBP13.4□□□□□ -0.26
SNED1-205ENST00000405547 IRF8Q02556 426 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 KHDC1Q4VXA5 237 aaKnown RBP13.4□□□□□ -0.26
SNED1-205ENST00000405547 KRT74Q7RTS7 529 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 HDAC10Q969S8 669 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 OR52E6Q96RD3 313 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 ASB8Q9H765 288 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 LRCH4O75427 683 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 SNHG28P0DPA3 235 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 LPOP22079 712 aaPredicted RBP13.4□□□□□ -0.26
SNED1-205ENST00000405547 CSNK2BP67870 215 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 CRTC3Q6UUV7 619 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 KIAA0319LQ8IZA0 1049 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 ZNF557Q8N988 423 aaPredicted RBP13.4□□□□□ -0.26
SNED1-205ENST00000405547 PDPRQ8NCN5 879 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 DUSP16Q9BY84 665 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 OSGEPL1Q9H4B0 414 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 ST6GALNAC4Q9H4F1 302 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 TMCC2O75069 709 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 PPIBP23284 216 aaKnown RBP13.4□□□□□ -0.26
SNED1-205ENST00000405547 ATP12AP54707 1039 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 MRPS5P82675 430 aaKnown RBP13.4□□□□□ -0.26
SNED1-205ENST00000405547 PTPRNQ16849 979 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 ZSWIM7Q19AV6 140 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 PTPN20Q4JDL3 420 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 PPP1R15BQ5SWA1 713 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 PPP1R26Q5T8A7 1209 aaPredicted RBP13.4□□□□□ -0.26
SNED1-205ENST00000405547 ANKRD49Q8WVL7 239 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 VPS35Q96QK1 796 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 PTTG2Q9NZH5 202 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 PSME2Q9UL46 239 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 PCDHGC3Q9UN70 934 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 LINC00032P0C843 101 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 BHLHB9Q6PI77 547 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 SLC4A11Q8NBS3 891 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 SLC47A1Q96FL8 570 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 PGLYRP2Q96PD5 576 aa13.4□□□□□ -0.26
SNED1-205ENST00000405547 BCL9LQ86UU0 1499 aa13.4□□□□□ -0.27
SNED1-205ENST00000405547 PEAK1Q9H792 1746 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 C5orf60A6NFR6 353 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 IPO13O94829 963 aaKnown RBP13.39□□□□□ -0.27
SNED1-205ENST00000405547 MSX2P35548 267 aaPredicted RBP13.39□□□□□ -0.27
SNED1-205ENST00000405547 CUZD1Q86UP6 607 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 CLPTM1LQ96KA5 538 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 COX4I2Q96KJ9 171 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 GAD1Q99259 594 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 CIB1Q99828 191 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 SSR3Q9UNL2 185 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 SAMD4AQ9UPU9 718 aaKnown RBP13.39□□□□□ -0.27
SNED1-205ENST00000405547 DERAQ9Y315 318 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 C2orf71A6NGG8 1288 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 HAT1O14929 419 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 TNFRSF21O75509 655 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 RPL9P32969 192 aaKnown RBP13.39□□□□□ -0.27
SNED1-205ENST00000405547 HUNKP57058 714 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 BRMS1LQ5PSV4 323 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 PLD5Q8N7P1 536 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 CDYL2Q8N8U2 506 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 ASZ1Q8WWH4 475 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 SPOCK2Q92563 424 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 MBD2Q9UBB5 411 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 RFXANKO14593 260 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 PAPSS1O43252 624 aaPredicted RBP13.39□□□□□ -0.27
SNED1-205ENST00000405547 CKBP12277 381 aa13.39□□□□□ -0.27
SNED1-205ENST00000405547 CDK9P50750 372 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms