RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 FBXO40Q9UH90 709 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 SARDHQ9UL12 918 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 PCDHA12Q9UN75 941 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 TOGARAM1Q9Y4F4 1720 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 MRC1P22897 1456 aa5.25□□□□□ -1.57
HMGB3P19-201ENST00000403971 AFF2P51816 1311 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 PCDH11XQ9BZA7 1347 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 PCDH11YQ9BZA8 1340 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 TEX13CA0A0J9YWL9 993 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 TMEM272A0A1B0GTI8 110 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 A0A1W2PPH5 198 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 LDLRAD4O15165 306 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 TNFSF14O43557 240 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 NDUFB8O95169 186 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 ZNF853P0CG23 659 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 SLC18A2Q05940 514 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 CCDC142Q17RM4 750 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 EDRF1Q3B7T1 1238 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 C1orf141Q5JVX7 400 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 FAAH2Q6GMR7 532 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 ZNF530Q6P9A1 599 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 TBC1D1Q86TI0 1168 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 SERPINA11Q86U17 422 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 FAM217AQ8IXS0 508 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 CNTROBQ8N137 903 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 NFKBIDQ8NI38 313 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 CENPIQ92674 756 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 ZFYVE19Q96K21 471 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 KLHL15Q96M94 604 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 B3GNT4Q9C0J1 378 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 WDR6Q9NNW5 1121 aaKnown RBP5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 PPP1R14DQ9NXH3 145 aa5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 TUBA8Q9NY65 449 aaPredicted RBP5.24□□□□□ -1.57
HMGB3P19-201ENST00000403971 PAPPAQ13219 1627 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 DOT1LQ8TEK3 1739 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 ARHGAP10A1A4S6 786 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 ERVV-2B6SEH9 535 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 CHL1O00533 1208 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 HSPB6O14558 160 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 RNMTO43148 476 aaKnown RBP5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 FGBP02675 491 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 GALTP07902 379 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 COX7A2P14406 83 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 YWHAQP27348 245 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 RFC1P35251 1148 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 RGS2P41220 211 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 CCR9P51686 369 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 CYP4A11Q02928 519 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 TAF7Q15545 349 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 ODF3L2Q3SX64 289 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 ZNF772Q68DY9 489 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 C1orf122Q6ZSJ8 110 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 TADA2BQ86TJ2 420 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 GPAT4Q86UL3 456 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 FAM185AQ8N0U4 392 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 TDRD7Q8NHU6 1098 aaKnown RBP5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 CEP76Q8TAP6 659 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 DENND1AQ8TEH3 1009 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 RPL36ALQ969Q0 106 aaKnown RBP5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 TRMOQ9BU70 441 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 NUF2Q9BZD4 464 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 LHPPQ9H008 270 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 RNF146Q9NTX7 359 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 C20orf141Q9NUB4 165 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 KCND2Q9NZV8 630 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 KIAA1456Q9P272 454 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 PCDHGB5Q9Y5G0 923 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 BCL9O00512 1426 aa5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 KDM6AO15550 1401 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 SOS1Q07889 1333 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P19-201ENST00000403971 LAMB4A4D0S4 1761 aa5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 ZNF831Q5JPB2 1677 aa5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 CBY3A6NI87 242 aa5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 EPN2O95208 641 aa5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 CLDN7O95471 211 aa5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 UBL4AP11441 157 aa5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 BLKP51451 505 aa5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 TEFQ10587 303 aa5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 GPATCH4Q5T3I0 446 aaKnown RBP5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 ATF7IPQ6VMQ6 1270 aa5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 LURAP1LQ8IV03 231 aa5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 CADM3Q8N126 398 aa5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 NRACQ8N912 160 aa5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 PIGOQ8TEQ8 1089 aa5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 HDAC2Q92769 488 aaKnown RBP5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 NR1H4Q96RI1 486 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 POLDIP3Q9BY77 421 aaKnown RBP5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 ZHX3Q9H4I2 956 aa5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 TBC1D14Q9P2M4 693 aa5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 ORC3Q9UBD5 711 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 SEL1LQ9UBV2 794 aa5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 CICQ96RK0 1608 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 FANCIQ9NVI1 1328 aa5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 KDM3AQ9Y4C1 1321 aa5.22□□□□□ -1.57
HMGB3P19-201ENST00000403971 NHSQ6T4R5 1651 aa5.21□□□□□ -1.57
HMGB3P19-201ENST00000403971 BTAF1O14981 1849 aa5.21□□□□□ -1.58
HMGB3P19-201ENST00000403971 A0A1W2PQM1 296 aa5.21□□□□□ -1.58
HMGB3P19-201ENST00000403971 STMND1H3BQB6 276 aa5.21□□□□□ -1.58
HMGB3P19-201ENST00000403971 SNAP23O00161 211 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms