RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 CCDC185Q8N715 623 aa12.45□□□□□ -0.42
PRAME-204ENST00000403441 RTL3Q8N8U3 475 aaKnown RBP12.45□□□□□ -0.42
PRAME-204ENST00000403441 OR6C4Q8NGE1 309 aa12.45□□□□□ -0.42
PRAME-204ENST00000403441 TMEM74Q96NL1 305 aa12.45□□□□□ -0.42
PRAME-204ENST00000403441 KLQ9UEF7 1012 aa12.45□□□□□ -0.42
PRAME-204ENST00000403441 CASC3O15234 703 aaKnown RBP12.44□□□□□ -0.42
PRAME-204ENST00000403441 CBFA2T2O43439 604 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 SERPING1P05155 500 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 TPM3P06753 285 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 JMJD7P0C870 316 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 TIMP2P16035 220 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 GPD1P21695 349 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 UGT1A5P35504 534 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 YBEYP58557 167 aaPredicted RBP12.44□□□□□ -0.42
PRAME-204ENST00000403441 SRP54P61011 504 aaKnown RBP12.44□□□□□ -0.42
PRAME-204ENST00000403441 OGDHQ02218 1023 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 KCNC4Q03721 635 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 MAMLD1Q13495 774 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 GRM3Q14832 879 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 WSCD2Q2TBF2 565 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 PARP15Q460N3 678 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 TMEM52BQ4KMG9 183 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 SPECC1LQ69YQ0 1117 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 DNAJC24Q6P3W2 148 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 ENPP7Q6UWV6 458 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 USP53Q70EK8 1073 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 PRICKLE2Q7Z3G6 844 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 SLFN11Q7Z7L1 901 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 B3GNT8Q7Z7M8 397 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 PHLDB2Q86SQ0 1253 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 DNAAF5Q86Y56 855 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 VSTM4Q8IW00 320 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 FNIP1Q8TF40 1166 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 TSACCQ96A04 125 aaPredicted RBP12.44□□□□□ -0.42
PRAME-204ENST00000403441 VOPP1Q96AW1 172 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 DNAJC7Q99615 494 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 SELENOOQ9BVL4 669 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 CPEB1Q9BZB8 566 aaKnown RBP12.44□□□□□ -0.42
PRAME-204ENST00000403441 FOXP3Q9BZS1 431 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 SEPT11Q9NVA2 429 aaKnown RBP12.44□□□□□ -0.42
PRAME-204ENST00000403441 SEPT10Q9P0V9 454 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 COQ6Q9Y2Z9 468 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 LUC7L2Q9Y383 392 aaKnown RBP12.44□□□□□ -0.42
PRAME-204ENST00000403441 OR1A2Q9Y585 309 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.44□□□□□ -0.423e-28■□□□□ 9.8
PRAME-204ENST00000403441 HEMK1Q9Y5R4 338 aaPredicted RBP12.44□□□□□ -0.42
PRAME-204ENST00000403441 SPTA1P02549 2419 aa12.44□□□□□ -0.42
PRAME-204ENST00000403441 AHCTF1Q8WYP5 2266 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 ANKRD62A6NC57 917 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 CCP110O43303 1012 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 PIGNO95427 931 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 PCCBP05166 539 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 SKILP12757 684 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 DESP17661 470 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 ITIH2P19823 946 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 CASP14P31944 242 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 CCKBRP32239 447 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 AIF1P55008 147 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 CCL7P80098 99 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 MTM1Q13496 603 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 SERINC3Q13530 473 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 TRIM14Q14142 442 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 INPP5AQ14642 412 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 BRAT1Q6PJG6 821 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 CCNJLQ8IV13 435 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 HCAR2Q8TDS4 363 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 TMEM159Q96B96 161 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 HMCESQ96FZ2 354 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 EXOC2Q96KP1 924 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 WDR92Q96MX6 357 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 MCEEQ96PE7 176 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 ARHGAP9Q9BRR9 750 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 CNPY3Q9BT09 278 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 APOOQ9BUR5 198 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 FAM117AQ9C073 453 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 NOL6Q9H6R4 1146 aaKnown RBP12.43□□□□□ -0.42
PRAME-204ENST00000403441 CATSPERBQ9H7T0 1116 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 PCDH12Q9NPG4 1184 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 PARVAQ9NVD7 372 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 UBA2Q9UBT2 640 aaPredicted RBP12.43□□□□□ -0.42
PRAME-204ENST00000403441 PISDQ9UG56 409 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 RABGEF1Q9UJ41 708 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 ACSL6Q9UKU0 697 aa12.43□□□□□ -0.42
PRAME-204ENST00000403441 A0A087X0T9 212 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 TSPAN11A1L157 253 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 TMEM191CA6NGB0 347 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 RASA4BC9J798 803 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 INSIG1O15503 277 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 FGF10O15520 208 aaPredicted RBP12.42□□□□□ -0.42
PRAME-204ENST00000403441 RASA4O43374 803 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 CREB3O43889 395 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 FTLP02792 175 aaPredicted RBP12.42□□□□□ -0.42
PRAME-204ENST00000403441 FAM228BP0C875 321 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 MYBL1P10243 752 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 LIPCP11150 499 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 MMP12P39900 470 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 LIG3P49916 1009 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 NFATC3Q12968 1075 aa12.42□□□□□ -0.42
PRAME-204ENST00000403441 TBX2Q13207 712 aaPredicted RBP12.42□□□□□ -0.42
PRAME-204ENST00000403441 UGP2Q16851 508 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms