RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 TREX1Q9NSU2 369 aa13.18□□□□□ -0.3
NDEL1-203ENST00000402554 SLC2A6Q9UGQ3 507 aa13.18□□□□□ -0.3
NDEL1-203ENST00000402554 ACTL7AQ9Y615 435 aa13.18□□□□□ -0.3
NDEL1-203ENST00000402554 OTOL1A6NHN0 477 aaPredicted RBP13.17□□□□□ -0.3
NDEL1-203ENST00000402554 SHISA7A6NL88 538 aa13.17□□□□□ -0.3
NDEL1-203ENST00000402554 SOBPA7XYQ1 873 aa13.17□□□□□ -0.3
NDEL1-203ENST00000402554 GOLGA8TH3BQL2 631 aa13.17□□□□□ -0.3
NDEL1-203ENST00000402554 GJB3O75712 270 aa13.17□□□□□ -0.3
NDEL1-203ENST00000402554 EPOP01588 193 aa13.17□□□□□ -0.3
NDEL1-203ENST00000402554 FGF1P05230 155 aa13.17□□□□□ -0.3
NDEL1-203ENST00000402554 ATXN1LP0C7T5 689 aaKnown RBP13.17□□□□□ -0.3
NDEL1-203ENST00000402554 HLA-DPA1P20036 260 aa13.17□□□□□ -0.3
NDEL1-203ENST00000402554 ARCN1P48444 511 aaKnown RBP13.17□□□□□ -0.3
NDEL1-203ENST00000402554 SERPINB4P48594 390 aa13.17□□□□□ -0.3
NDEL1-203ENST00000402554 SERPINB8P50452 374 aa13.17□□□□□ -0.3
NDEL1-203ENST00000402554 ITIH4Q14624 930 aa13.17□□□□□ -0.3
NDEL1-203ENST00000402554 CNGA3Q16281 694 aa13.17□□□□□ -0.3
NDEL1-203ENST00000402554 C6orf89Q6UWU4 347 aa13.17□□□□□ -0.3
NDEL1-203ENST00000402554 SPATA21Q7Z572 469 aa13.17□□□□□ -0.3
NDEL1-203ENST00000402554 CNTN4Q8IWV2 1026 aa13.17□□□□□ -0.3
NDEL1-203ENST00000402554 SUGP1Q8IWZ8 645 aaKnown RBP13.17□□□□□ -0.3
NDEL1-203ENST00000402554 DCLK2Q8N568 766 aa13.17□□□□□ -0.3
NDEL1-203ENST00000402554 CSGALNACT1Q8TDX6 532 aa13.17□□□□□ -0.3
NDEL1-203ENST00000402554 SPOCK2Q92563 424 aa13.17□□□□□ -0.3
NDEL1-203ENST00000402554 ATP2A3Q93084 1043 aa13.17□□□□□ -0.3
NDEL1-203ENST00000402554 MTF2Q9Y483 593 aaPredicted RBP13.17□□□□□ -0.3
NDEL1-203ENST00000402554 PIAS3Q9Y6X2 628 aa13.17□□□□□ -0.3
NDEL1-203ENST00000402554 ATXN2Q99700 1313 aaKnown RBP13.17□□□□□ -0.3
NDEL1-203ENST00000402554 PAPSS2O95340 614 aaPredicted RBP13.16□□□□□ -0.3
NDEL1-203ENST00000402554 CES1P23141 567 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 TYK2P29597 1187 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 SF3A3Q12874 501 aaKnown RBP eCLIP13.16□□□□□ -0.32e-6■■□□□ 13.2
NDEL1-203ENST00000402554 IFT88Q13099 833 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 MSLNQ13421 630 aaPredicted RBP13.16□□□□□ -0.3
NDEL1-203ENST00000402554 CDH18Q13634 790 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 THOC5Q13769 683 aaKnown RBP13.16□□□□□ -0.3
NDEL1-203ENST00000402554 PDE1CQ14123 709 aaPredicted RBP13.16□□□□□ -0.3
NDEL1-203ENST00000402554 CYTH1Q15438 398 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 UGP2Q16851 508 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 FSCBQ5H9T9 825 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 TSTD2Q5T7W7 516 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 FSTL4Q6MZW2 842 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 NLRP9Q7RTR0 991 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 CPXM2Q8N436 756 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 ISL2Q96A47 359 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 ATXN7L3BQ96GX2 97 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 FAM83CQ9BQN1 747 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 FEM1AQ9BSK4 669 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 MCMBPQ9BTE3 642 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 LINC00597Q9H2U6 94 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 MANSC1Q9H8J5 431 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 SNX15Q9NRS6 342 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 THG1LQ9NWX6 298 aaKnown RBP13.16□□□□□ -0.3
NDEL1-203ENST00000402554 DCDC2Q9UHG0 476 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 VPS28Q9UK41 221 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 PHTF1Q9UMS5 762 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 ZNF318Q5VUA4 2279 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 INSIG1O15503 277 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 EDF1O60869 148 aaKnown RBP13.16□□□□□ -0.3
NDEL1-203ENST00000402554 SIN3BO75182 1162 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 GLRA3O75311 464 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 ZMPSTE24O75844 475 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 KIAA0754O94854 1291 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 DCNP07585 359 aaKnown RBP13.16□□□□□ -0.3
NDEL1-203ENST00000402554 NEFHP12036 1026 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 ARNTP27540 789 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 MZF1P28698 734 aaPredicted RBP13.16□□□□□ -0.3
NDEL1-203ENST00000402554 HADHAP40939 763 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 MAGEA12P43365 314 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 SCNN1BP51168 640 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 ARF5P84085 180 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 LAMB3Q13751 1172 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 UBXN2BQ14CS0 331 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 NAIF1Q69YI7 327 aaPredicted RBP13.16□□□□□ -0.3
NDEL1-203ENST00000402554 KYAT3Q6YP21 454 aaKnown RBP13.16□□□□□ -0.3
NDEL1-203ENST00000402554 BBS7Q8IWZ6 715 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 ARMC2Q8NEN0 867 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 DDI1Q8WTU0 396 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 PTPRN2Q92932 1015 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 VPS39Q96JC1 886 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 FAM167BQ9BTA0 163 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 NOD2Q9HC29 1040 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 SLCO1B3Q9NPD5 702 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 SCUBE2Q9NQ36 999 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 DUS2Q9NX74 493 aaKnown RBP13.16□□□□□ -0.3
NDEL1-203ENST00000402554 NDRG2Q9UN36 371 aaKnown RBP13.16□□□□□ -0.3
NDEL1-203ENST00000402554 MTO1Q9Y2Z2 717 aaKnown RBP13.16□□□□□ -0.3
NDEL1-203ENST00000402554 STARD13Q9Y3M8 1113 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 MYLKQ15746 1914 aa13.16□□□□□ -0.3
NDEL1-203ENST00000402554 MROH6A6NGR9 719 aa13.15□□□□□ -0.3
NDEL1-203ENST00000402554 SNAP91O60641 907 aa13.15□□□□□ -0.3
NDEL1-203ENST00000402554 NDST3O95803 873 aa13.15□□□□□ -0.3
NDEL1-203ENST00000402554 MPOP05164 745 aa13.15□□□□□ -0.3
NDEL1-203ENST00000402554 F7P08709 466 aaPredicted RBP13.15□□□□□ -0.3
NDEL1-203ENST00000402554 CR2P20023 1033 aa13.15□□□□□ -0.3
NDEL1-203ENST00000402554 TARSP26639 723 aaKnown RBP13.15□□□□□ -0.3
NDEL1-203ENST00000402554 CSKP41240 450 aa13.15□□□□□ -0.3
NDEL1-203ENST00000402554 ABCG1P45844 678 aa13.15□□□□□ -0.3
NDEL1-203ENST00000402554 RGRP47804 291 aa13.15□□□□□ -0.3
NDEL1-203ENST00000402554 STARD6P59095 220 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms