RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 CPP00450 1065 aa19.3■□□□□ 0.68
RTN4-207ENST00000402434 MMP2P08253 660 aa19.3■□□□□ 0.68
RTN4-207ENST00000402434 PDHA1P08559 390 aa19.3■□□□□ 0.68
RTN4-207ENST00000402434 THEGLP0DJG4 465 aa19.3■□□□□ 0.68
RTN4-207ENST00000402434 XRCC4Q13426 336 aa19.3■□□□□ 0.68
RTN4-207ENST00000402434 TEX44Q53QW1 395 aa19.3■□□□□ 0.68
RTN4-207ENST00000402434 LIPIQ6XZB0 460 aa19.3■□□□□ 0.68
RTN4-207ENST00000402434 KYAT3Q6YP21 454 aaKnown RBP19.3■□□□□ 0.68
RTN4-207ENST00000402434 DPPA4Q7L190 304 aa19.3■□□□□ 0.68
RTN4-207ENST00000402434 ZC3H18Q86VM9 953 aaKnown RBP19.3■□□□□ 0.68
RTN4-207ENST00000402434 PIH1D2Q8WWB5 315 aa19.3■□□□□ 0.68
RTN4-207ENST00000402434 SCRN2Q96FV2 425 aa19.3■□□□□ 0.68
RTN4-207ENST00000402434 MCCC1Q96RQ3 725 aaPredicted RBP19.3■□□□□ 0.68
RTN4-207ENST00000402434 C1QTNF7Q9BXJ2 289 aa19.3■□□□□ 0.68
RTN4-207ENST00000402434 LRRK1Q38SD2 2015 aa19.29■□□□□ 0.68
RTN4-207ENST00000402434 A0A1B0GTQ1 180 aa19.29■□□□□ 0.68
RTN4-207ENST00000402434 A6NNZ2 444 aa19.29■□□□□ 0.68
RTN4-207ENST00000402434 HACD1B0YJ81 288 aa19.29■□□□□ 0.68
RTN4-207ENST00000402434 FPGTO14772 594 aa19.29■□□□□ 0.68
RTN4-207ENST00000402434 PCDHGA12O60330 932 aa19.29■□□□□ 0.68
RTN4-207ENST00000402434 PRLP01236 227 aa19.29■□□□□ 0.68
RTN4-207ENST00000402434 C6P13671 934 aa19.29■□□□□ 0.68
RTN4-207ENST00000402434 NFKBIAP25963 317 aa19.29■□□□□ 0.68
RTN4-207ENST00000402434 PTPN3P26045 913 aa19.29■□□□□ 0.68
RTN4-207ENST00000402434 SEMG2Q02383 582 aa19.29■□□□□ 0.68
RTN4-207ENST00000402434 WASHC5Q12768 1159 aa19.29■□□□□ 0.68
RTN4-207ENST00000402434 NOMO1Q15155 1222 aa19.29■□□□□ 0.68
RTN4-207ENST00000402434 AADACL2Q6P093 401 aa19.29■□□□□ 0.68
RTN4-207ENST00000402434 Q6ZSR6 202 aa19.29■□□□□ 0.68
RTN4-207ENST00000402434 DCP2Q8IU60 420 aaKnown RBP19.29■□□□□ 0.68
RTN4-207ENST00000402434 CBARPQ8N350 705 aaPredicted RBP19.29■□□□□ 0.68
RTN4-207ENST00000402434 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.29■□□□□ 0.68
RTN4-207ENST00000402434 TP53I13Q8NBR0 393 aaPredicted RBP19.29■□□□□ 0.68
RTN4-207ENST00000402434 OR13H1Q8NG92 308 aa19.29■□□□□ 0.68
RTN4-207ENST00000402434 HAUS1Q96CS2 278 aa19.29■□□□□ 0.68
RTN4-207ENST00000402434 TEKT5Q96M29 485 aa19.29■□□□□ 0.68
RTN4-207ENST00000402434 AGAP3Q96P47 875 aa19.29■□□□□ 0.68
RTN4-207ENST00000402434 TDRD1Q9BXT4 1180 aaKnown RBP19.29■□□□□ 0.68
RTN4-207ENST00000402434 B4GALT6Q9UBX8 382 aa19.29■□□□□ 0.68
RTN4-207ENST00000402434 TJP3O95049 919 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 RXRGP48443 463 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 PFN3P60673 137 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 SKOR1P84550 965 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 SHBQ15464 509 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 PRAMEF14Q5SWL7 426 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 ERMP1Q7Z2K6 904 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 ACTL9Q8TC94 416 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 TADA1Q96BN2 335 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 IMP4Q96G21 291 aaKnown RBP19.28■□□□□ 0.68
RTN4-207ENST00000402434 QKIQ96PU8 341 aaKnown RBP eCLIP19.28■□□□□ 0.682e-7■■■■■ 69
RTN4-207ENST00000402434 CEP41Q9BYV8 373 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 SLC25A51Q9H1U9 297 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 LZTFL1Q9NQ48 299 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 SEPT10Q9P0V9 454 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 COQ6Q9Y2Z9 468 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 TP53BP1Q12888 1972 aaPredicted RBP19.28■□□□□ 0.68
RTN4-207ENST00000402434 KCNK5O95279 499 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 ELFN1P0C7U0 828 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 CEACAM1P13688 526 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 CA4P22748 312 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 CD86P42081 329 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 RABIFP47224 123 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 ARRB1P49407 418 aaPredicted RBP19.28■□□□□ 0.68
RTN4-207ENST00000402434 CCT8P50990 548 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 RPL26P61254 145 aaKnown RBP19.28■□□□□ 0.68
RTN4-207ENST00000402434 OTUD4Q01804 1114 aaKnown RBP19.28■□□□□ 0.68
RTN4-207ENST00000402434 ZNF211Q13398 564 aaPredicted RBP19.28■□□□□ 0.68
RTN4-207ENST00000402434 LRRC14Q15048 493 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 SLC14A2Q15849 920 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 WSCD2Q2TBF2 565 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 CCDC181Q5TID7 509 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 SLC22A18ASQ8N1D0 253 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 OXR1Q8N573 874 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 PDLIM2Q96JY6 352 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 VAT1Q99536 393 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 MBNL1Q9NR56 388 aaKnown RBP19.28■□□□□ 0.68
RTN4-207ENST00000402434 RPL26L1Q9UNX3 145 aaKnown RBP19.28■□□□□ 0.68
RTN4-207ENST00000402434 CHKBQ9Y259 395 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 PPP2R2CQ9Y2T4 447 aa19.28■□□□□ 0.68
RTN4-207ENST00000402434 A0A0J9YYE9 177 aa19.27■□□□□ 0.67
RTN4-207ENST00000402434 TOR1BO14657 336 aa19.27■□□□□ 0.67
RTN4-207ENST00000402434 YKT6O15498 198 aa19.27■□□□□ 0.67
RTN4-207ENST00000402434 LZTS3O60299 673 aaPredicted RBP19.27■□□□□ 0.67
RTN4-207ENST00000402434 HEXIM1O94992 359 aaKnown RBP19.27■□□□□ 0.67
RTN4-207ENST00000402434 TRBC1P01850 177 aa19.27■□□□□ 0.67
RTN4-207ENST00000402434 GM2AP17900 193 aa19.27■□□□□ 0.67
RTN4-207ENST00000402434 VIPR1P32241 457 aa19.27■□□□□ 0.67
RTN4-207ENST00000402434 IGFALSP35858 605 aa19.27■□□□□ 0.67
RTN4-207ENST00000402434 KLF1Q13351 362 aaPredicted RBP19.27■□□□□ 0.67
RTN4-207ENST00000402434 SUZ12Q15022 739 aaKnown RBP19.27■□□□□ 0.67
RTN4-207ENST00000402434 FAM182AQ5T1J6 154 aa19.27■□□□□ 0.67
RTN4-207ENST00000402434 USP45Q70EL2 814 aa19.27■□□□□ 0.67
RTN4-207ENST00000402434 NDUFAF2Q8N183 169 aa19.27■□□□□ 0.67
RTN4-207ENST00000402434 HTR3CQ8WXA8 447 aa19.27■□□□□ 0.67
RTN4-207ENST00000402434 IFT43Q96FT9 208 aa19.27■□□□□ 0.67
RTN4-207ENST00000402434 GLOD4Q9HC38 313 aa19.27■□□□□ 0.67
RTN4-207ENST00000402434 SPTY2D1-AS1A0A0U1RR47 76 aa19.26■□□□□ 0.67
RTN4-207ENST00000402434 NPIPB15A6NHN6 443 aaPredicted RBP19.26■□□□□ 0.67
RTN4-207ENST00000402434 A8MX80 341 aa19.26■□□□□ 0.67
RTN4-207ENST00000402434 SH3BP5O60239 455 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms