RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 CCDC162PA2VCL2 907 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 TRAFD1O14545 582 aaPredicted RBP25.72■■□□□ 1.71
CPNE1-205ENST00000401607 TRIM24O15164 1050 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 PGLSO95336 258 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 PIGNO95427 931 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 IGSF6O95976 241 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 GOT2P00505 430 aaKnown RBP25.72■■□□□ 1.71
CPNE1-205ENST00000401607 CYP17A1P05093 508 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 BMP1P13497 986 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 GKP32189 559 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 MAPK8P45983 427 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 LEPRP48357 1165 aaKnown RBP25.72■■□□□ 1.71
CPNE1-205ENST00000401607 DMC1Q14565 340 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 INSCQ1MX18 579 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 EML3Q32P44 896 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 COL13A1Q5TAT6 717 aaPredicted RBP25.72■■□□□ 1.71
CPNE1-205ENST00000401607 N4BP2L1Q5TBK1 243 aaPredicted RBP25.72■■□□□ 1.71
CPNE1-205ENST00000401607 TRIM68Q6AZZ1 485 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 CGB2Q6NT52 195 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 C16orf46Q6P387 395 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 C22orf39Q6P5X5 142 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 CNSTQ6PJW8 725 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 KYAT3Q6YP21 454 aaKnown RBP25.72■■□□□ 1.71
CPNE1-205ENST00000401607 FAM47EQ6ZV65 393 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 GALNT7Q86SF2 657 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 NAT16Q8N8M0 369 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 PNPLA1Q8N8W4 532 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 OR2AP1Q8NGE2 309 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 ASIC4Q96FT7 647 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 CABS1Q96KC9 395 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 ELAC2Q9BQ52 826 aaKnown RBP25.72■■□□□ 1.71
CPNE1-205ENST00000401607 SLCO1B3Q9NPD5 702 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 CDH23Q9H251 3354 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 TRANK1O15050 2925 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 A0A096LPK6 155 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 FAM95CA0A1B0GW59 222 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 LINC01565O15544 149 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 C2P06681 752 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 TCEAL5Q5H9L2 206 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 ARMC12Q5T9G4 340 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 TMEM215Q68D42 235 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 TMEM184AQ6ZMB5 413 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 CLEC14AQ86T13 490 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 SLC41A1Q8IVJ1 513 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 LMNTD2Q8IXW0 634 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 PLD6Q8N2A8 252 aaKnown RBP25.72■■□□□ 1.71
CPNE1-205ENST00000401607 GABPB2Q8TAK5 448 aaPredicted RBP25.72■■□□□ 1.71
CPNE1-205ENST00000401607 PIH1D2Q8WWB5 315 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 ISG20Q96AZ6 181 aaKnown RBP25.72■■□□□ 1.71
CPNE1-205ENST00000401607 CDKN2AIPNLQ96HQ2 116 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 SLC2A11Q9BYW1 496 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 SLC25A13Q9UJS0 675 aa25.72■■□□□ 1.71
CPNE1-205ENST00000401607 HTRA2O43464 458 aaPredicted RBP25.71■■□□□ 1.71
CPNE1-205ENST00000401607 ABL2P42684 1182 aa25.71■■□□□ 1.71
CPNE1-205ENST00000401607 GRIA4P48058 902 aa25.71■■□□□ 1.71
CPNE1-205ENST00000401607 IRF9Q00978 393 aa25.71■■□□□ 1.71
CPNE1-205ENST00000401607 BCL2L1Q07817 233 aa25.71■■□□□ 1.71
CPNE1-205ENST00000401607 HYAL1Q12794 435 aa25.71■■□□□ 1.71
CPNE1-205ENST00000401607 USP10Q14694 798 aaKnown RBP25.71■■□□□ 1.71
CPNE1-205ENST00000401607 GET4Q7L5D6 327 aaPredicted RBP25.71■■□□□ 1.71
CPNE1-205ENST00000401607 LDB1Q86U70 411 aaPredicted RBP25.71■■□□□ 1.71
CPNE1-205ENST00000401607 TTC30BQ8N4P2 665 aa25.71■■□□□ 1.71
CPNE1-205ENST00000401607 OTUD6BQ8N6M0 293 aa25.71■■□□□ 1.71
CPNE1-205ENST00000401607 EFHBQ8N7U6 833 aa25.71■■□□□ 1.71
CPNE1-205ENST00000401607 OR4K2Q8NGD2 314 aa25.71■■□□□ 1.71
CPNE1-205ENST00000401607 SMARCD2Q92925 531 aa25.71■■□□□ 1.71
CPNE1-205ENST00000401607 MECRQ9BV79 373 aa25.71■■□□□ 1.71
CPNE1-205ENST00000401607 MANSC1Q9H8J5 431 aa25.71■■□□□ 1.71
CPNE1-205ENST00000401607 FBXO10Q9UK96 956 aa25.71■■□□□ 1.71
CPNE1-205ENST00000401607 BPTFQ12830 3046 aa25.7■■□□□ 1.71
CPNE1-205ENST00000401607 EBAG9O00559 213 aa25.7■■□□□ 1.7
CPNE1-205ENST00000401607 POLD2P49005 469 aa25.7■■□□□ 1.7
CPNE1-205ENST00000401607 PGGT1BP53609 377 aa25.7■■□□□ 1.7
CPNE1-205ENST00000401607 SULT2A1Q06520 285 aa25.7■■□□□ 1.7
CPNE1-205ENST00000401607 SF3A3Q12874 501 aaKnown RBP eCLIP25.7■■□□□ 1.73e-8■■■□□ 16.9
CPNE1-205ENST00000401607 GPR150Q8NGU9 434 aa25.7■■□□□ 1.7
CPNE1-205ENST00000401607 BPIFB1Q8TDL5 484 aa25.7■■□□□ 1.7
CPNE1-205ENST00000401607 PPP2R3CQ969Q6 453 aa25.7■■□□□ 1.7
CPNE1-205ENST00000401607 ZNF358Q9NW07 568 aa25.7■■□□□ 1.7
CPNE1-205ENST00000401607 TMEM216Q9P0N5 145 aa25.7■■□□□ 1.7
CPNE1-205ENST00000401607 PDE4DIPQ5VU43 2346 aa25.7■■□□□ 1.7
CPNE1-205ENST00000401607 LAMA3Q16787 3333 aa25.7■■□□□ 1.7
CPNE1-205ENST00000401607 C2orf81A6NN90 581 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 SNX3O60493 162 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 PLIN3O60664 434 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 EDF1O60869 148 aaKnown RBP25.69■■□□□ 1.7
CPNE1-205ENST00000401607 SOCS5O75159 536 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 GSRP00390 522 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 BGNP21810 368 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 HNRNPH2P55795 449 aaKnown RBP25.69■■□□□ 1.7
CPNE1-205ENST00000401607 SNRPD1P62314 119 aaKnown RBP25.69■■□□□ 1.7
CPNE1-205ENST00000401607 ECT2LQ008S8 904 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 GEN1Q17RS7 908 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 MBLAC2Q68D91 279 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 SYCE2Q6PIF2 218 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 CACNA2D3Q8IZS8 1091 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 AHI1Q8N157 1196 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 TIFAQ96CG3 184 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 PITPNM3Q9BZ71 974 aa25.69■■□□□ 1.7
CPNE1-205ENST00000401607 CEP44Q9C0F1 390 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms