RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 VPS16Q9H269 839 aa12□□□□□ -0.49
LINC00544-201ENST00000400540 CLSTN2Q9H4D0 955 aa12□□□□□ -0.49
LINC00544-201ENST00000400540 SUV39H2Q9H5I1 410 aa12□□□□□ -0.49
LINC00544-201ENST00000400540 FAM207AQ9NSI2 230 aaPredicted RBP12□□□□□ -0.49
LINC00544-201ENST00000400540 ADAM22Q9P0K1 906 aa12□□□□□ -0.49
LINC00544-201ENST00000400540 UBA2Q9UBT2 640 aaPredicted RBP12□□□□□ -0.49
LINC00544-201ENST00000400540 ACSL6Q9UKU0 697 aa12□□□□□ -0.49
LINC00544-201ENST00000400540 FZD10Q9ULW2 581 aa12□□□□□ -0.49
LINC00544-201ENST00000400540 ATP8A1Q9Y2Q0 1164 aa12□□□□□ -0.49
LINC00544-201ENST00000400540 RNF215Q9Y6U7 377 aa12□□□□□ -0.49
LINC00544-201ENST00000400540 TCRBV5S1A1TA0A578 114 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 WASH4PA8MWX3 477 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 C9orf172C9J069 976 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 TMX2-CTNND1H3BSU7 103 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 ARHGAP6O43182 974 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 TNFP01375 233 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 FAM87AP0C7U9 286 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 GM2AP17900 193 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 ERCC5P28715 1186 aaPredicted RBP11.99□□□□□ -0.49
LINC00544-201ENST00000400540 NSFP46459 744 aaKnown RBP11.99□□□□□ -0.49
LINC00544-201ENST00000400540 SUOXP51687 545 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 MAPK10P53779 464 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 GSCP56915 257 aaPredicted RBP11.99□□□□□ -0.49
LINC00544-201ENST00000400540 YBEYP58557 167 aaPredicted RBP11.99□□□□□ -0.49
LINC00544-201ENST00000400540 RPL7AP62424 266 aaKnown RBP11.99□□□□□ -0.49
LINC00544-201ENST00000400540 CYP4F2P78329 520 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 ZFP36L1Q07352 338 aaKnown RBP11.99□□□□□ -0.49
LINC00544-201ENST00000400540 MTM1Q13496 603 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 AGERQ15109 404 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 CLEC16AQ2KHT3 1053 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 PARP15Q460N3 678 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 CERCAMQ5T4B2 595 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 ERAP2Q6P179 960 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 SPRED1Q7Z699 444 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 TAF8Q7Z7C8 310 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 UMODL1-AS1Q8N2C9 162 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 C3orf20Q8ND61 904 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 FAM46DQ8NEK8 389 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 TMEM74Q96NL1 305 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 MCEEQ96PE7 176 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 FAM117AQ9C073 453 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 TMEM168Q9H0V1 697 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 SEMA6CQ9H3T2 930 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 LRRC19Q9H756 370 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 GPATCH2LQ9NWQ4 482 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 APPL1Q9UKG1 709 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 PCDHGA4Q9Y5G9 962 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 HEMK1Q9Y5R4 338 aaPredicted RBP11.99□□□□□ -0.49
LINC00544-201ENST00000400540 DGKBQ9Y6T7 804 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 NBPF19A0A087WUL8 3843 aa11.99□□□□□ -0.49
LINC00544-201ENST00000400540 A8MX80 341 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 NVLO15381 856 aaKnown RBP11.98□□□□□ -0.49
LINC00544-201ENST00000400540 RECQL5O94762 991 aaPredicted RBP11.98□□□□□ -0.49
LINC00544-201ENST00000400540 GLB1P16278 677 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 ITGB6P18564 788 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 EEF1GP26641 437 aaKnown RBP11.98□□□□□ -0.49
LINC00544-201ENST00000400540 KIAA1024LP59773 190 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 OGDHQ02218 1023 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 HLTFQ14527 1009 aaKnown RBP eCLIP11.98□□□□□ -0.49
LINC00544-201ENST00000400540 C16orf72Q14CZ0 275 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 C14orf28Q4W4Y0 310 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 MANEAQ5SRI9 462 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 CFAP58Q5T655 872 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 PHF19Q5T6S3 580 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 SPECC1LQ69YQ0 1117 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 TRIM72Q6ZMU5 477 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 MON1BQ7L1V2 547 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 PHF13Q86YI8 300 aaPredicted RBP11.98□□□□□ -0.49
LINC00544-201ENST00000400540 SLITRK4Q8IW52 837 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 TSEN2Q8NCE0 465 aaKnown RBP11.98□□□□□ -0.49
LINC00544-201ENST00000400540 OR6C4Q8NGE1 309 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 OR56A4Q8NGH8 313 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 ATL2Q8NHH9 583 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 HCAR2Q8TDS4 363 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 HTR3CQ8WXA8 447 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 USP7Q93009 1102 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 NSMCE3Q96MG7 304 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 ARHGAP9Q9BRR9 750 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 LGR4Q9BXB1 951 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 SUDS3Q9H7L9 328 aaPredicted RBP11.98□□□□□ -0.49
LINC00544-201ENST00000400540 CATSPERBQ9H7T0 1116 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 STARD5Q9NSY2 213 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 LRIT1Q9P2V4 623 aa11.98□□□□□ -0.49
LINC00544-201ENST00000400540 UTP20O75691 2785 aaKnown RBP11.98□□□□□ -0.49
LINC00544-201ENST00000400540 ZNF106Q9H2Y7 1883 aaKnown RBP11.97□□□□□ -0.49
LINC00544-201ENST00000400540 SIGLEC16A6NMB1 481 aa11.97□□□□□ -0.49
LINC00544-201ENST00000400540 CACNB4O00305 520 aaPredicted RBP11.97□□□□□ -0.49
LINC00544-201ENST00000400540 TERTO14746 1132 aaKnown RBP11.97□□□□□ -0.49
LINC00544-201ENST00000400540 PRAMEF11O60813 436 aa11.97□□□□□ -0.49
LINC00544-201ENST00000400540 CALB1P05937 261 aa11.97□□□□□ -0.49
LINC00544-201ENST00000400540 ELFN1P0C7U0 828 aa11.97□□□□□ -0.49
LINC00544-201ENST00000400540 ZNF143P52747 638 aaPredicted RBP11.97□□□□□ -0.49
LINC00544-201ENST00000400540 MAZP56270 477 aaKnown RBP11.97□□□□□ -0.49
LINC00544-201ENST00000400540 TPI1P60174 286 aa11.97□□□□□ -0.49
LINC00544-201ENST00000400540 KRT31Q15323 416 aa11.97□□□□□ -0.49
LINC00544-201ENST00000400540 CA9Q16790 459 aa11.97□□□□□ -0.49
LINC00544-201ENST00000400540 PPP1R15BQ5SWA1 713 aa11.97□□□□□ -0.49
LINC00544-201ENST00000400540 DNAJC24Q6P3W2 148 aa11.97□□□□□ -0.49
LINC00544-201ENST00000400540 BRAT1Q6PJG6 821 aa11.97□□□□□ -0.49
LINC00544-201ENST00000400540 OGFOD3Q6PK18 319 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms