RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 TMEM86AQ8N2M4 240 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 DHRSXQ8N5I4 330 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 CDYL2Q8N8U2 506 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 SPATA20Q8TB22 786 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 POPDC2Q9HBU9 364 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 TMEM138Q9NPI0 162 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 CDH9Q9ULB4 789 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 CTDNEP1O95476 244 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 CATP04040 527 aaKnown RBP11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 FDPSP14324 419 aaKnown RBP11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 ABRQ12979 859 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 SAMD4BQ5PRF9 694 aaKnown RBP11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 HID1Q8IV36 788 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 STRADBQ9C0K7 418 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 DSN1Q9H410 356 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 PIH1D1Q9NWS0 290 aaKnown RBP11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 KLQ9UEF7 1012 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 NAALADL1Q9UQQ1 740 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 FGF10O15520 208 aaPredicted RBP11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 SSNA1O43805 119 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 PSIP1O75475 530 aaKnown RBP11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 CCL5P13501 91 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 ERCC2P18074 760 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 ZNF135P52742 658 aaPredicted RBP11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 PYDC2Q56P42 97 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 ZNF549Q6P9A3 640 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 CRELD2Q6UXH1 353 aaPredicted RBP11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 USP49Q70CQ1 688 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 SLC41A1Q8IVJ1 513 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 SEMA6AQ9H2E6 1030 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 PRDM16Q9HAZ2 1276 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 PTGFRNQ9P2B2 879 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 ZNF780BQ9Y6R6 833 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 FTH1P02794 183 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 OR1D2P34982 312 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 TIE1P35590 1138 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 RPL3P39023 403 aaKnown RBP11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 CBX2Q14781 532 aaPredicted RBP11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 HMBOX1Q6NT76 420 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 EXOC3L1Q86VI1 746 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 PJA1Q8NG27 643 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 TRPM4Q8TD43 1214 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 SELENOMQ8WWX9 145 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 MLPHQ9BV36 600 aaPredicted RBP11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 CCDC167Q9P0B6 97 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 MRPS33Q9Y291 106 aaKnown RBP11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 C1orf167Q5SNV9 1468 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 ITGA2P17301 1181 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 HOXB8P17481 243 aaPredicted RBP11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 ABL2P42684 1182 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 CACNA2D1P54289 1103 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 C16orf46Q6P387 395 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 CES3Q6UWW8 571 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 CYP2R1Q6VVX0 501 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 DEFB106AQ8N104 65 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 SENP8Q96LD8 212 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 MMADHCQ9H3L0 296 aaPredicted RBP11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 TMEM5Q9Y2B1 443 aa11.1□□□□□ -0.63
CACNA1C-215ENST00000399637 GLTPD2A6NH11 291 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 ZNF432O94892 652 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 SMIM11AP58511 58 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 PPP4CP60510 307 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 RPP38P78345 283 aaKnown RBP11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 LGALS3BPQ08380 585 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 SMCO1Q147U7 214 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 SF1Q15637 639 aaKnown RBP11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 SULT1C3Q6IMI6 304 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 AFTPHQ6ULP2 937 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 IFNL1Q8IU54 200 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 Q8N9G6 341 aaPredicted RBP11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 COPS5Q92905 334 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 TATDN2Q93075 761 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 ART5Q96L15 291 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 DCBLD2Q96PD2 775 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 LGMNQ99538 433 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 SEMA6BQ9H3T3 888 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 BPIFA1Q9NP55 256 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 PSMD9O00233 223 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 S100A1P23297 94 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 ALDH4A1P30038 563 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 C2orf73Q8N5S3 287 aaPredicted RBP11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 SLC25A23Q9BV35 468 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 OSGEPQ9NPF4 335 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 PHPT1Q9NRX4 125 aaPredicted RBP11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 ZNF510Q9Y2H8 683 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 SALL1Q9NSC2 1324 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 RECQL4O94761 1208 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 PAEPP09466 180 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 ME2P23368 584 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 UGT2B15P54855 530 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 SLC34A1Q06495 639 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 RAPSNQ13702 412 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 FBXO30Q8TB52 745 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 ZNF483Q8TF39 744 aaPredicted RBP11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 MYDGFQ969H8 173 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 MYLPFQ96A32 169 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 VAT1Q99536 393 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 KIF20BQ96Q89 1820 aa11.09□□□□□ -0.63
CACNA1C-215ENST00000399637 DCLK1O15075 740 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms