RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 VSIG1Q86XK7 387 aa14.95□□□□□ -0.02
SMIM11A-203ENST00000399299 CACTIN-AS1Q8N1I8 211 aa14.95□□□□□ -0.02
SMIM11A-203ENST00000399299 PAF1Q8N7H5 531 aa14.95□□□□□ -0.02
SMIM11A-203ENST00000399299 MAML1Q92585 1016 aa14.95□□□□□ -0.02
SMIM11A-203ENST00000399299 TSGA13Q96PP4 275 aa14.95□□□□□ -0.02
SMIM11A-203ENST00000399299 NOD2Q9HC29 1040 aa14.95□□□□□ -0.02
SMIM11A-203ENST00000399299 EVA1BQ9NVM1 165 aa14.95□□□□□ -0.02
SMIM11A-203ENST00000399299 DKK4Q9UBT3 224 aa14.95□□□□□ -0.02
SMIM11A-203ENST00000399299 APOBEC3BQ9UH17 382 aaKnown RBP14.95□□□□□ -0.02
SMIM11A-203ENST00000399299 APC2O95996 2303 aa14.95□□□□□ -0.02
SMIM11A-203ENST00000399299 MYLKQ15746 1914 aa14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 K7ESM1 405 aa14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 MATN3O15232 486 aa14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 RECQL5O94762 991 aaPredicted RBP14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 PRKCGP05129 697 aa14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 MX2P20592 715 aa14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 CCNCP24863 283 aa14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 BLKP51451 505 aa14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 DUSP3P51452 185 aaPredicted RBP14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 DAB2P98082 770 aa14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 E2F1Q01094 437 aa14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 NFATC4Q14934 902 aa14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 ZCCHC8Q6NZY4 707 aaKnown RBP14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 PROSER1Q86XN7 944 aa14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 PHACTR4Q8IZ21 702 aa14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 PQLC3Q8N755 202 aa14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 PDCD7Q8N8D1 485 aaKnown RBP14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 APOLD1Q96LR9 279 aa14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 TRIM5Q9C035 493 aa14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 CCDC86Q9H6F5 360 aaKnown RBP14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 CAAP1Q9H8G2 361 aa14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 HAUS2Q9NVX0 235 aa14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 KCTD5Q9NXV2 234 aa14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 NCKIPSDQ9NZQ3 722 aa14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 SPASTQ9UBP0 616 aa14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 PHTF1Q9UMS5 762 aa14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 PCDHGC4Q9Y5F7 938 aa14.94□□□□□ -0.02
SMIM11A-203ENST00000399299 CFAP47Q6ZTR5 3102 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 LY6G6EA0A0G2JKS1 128 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 TTC24A2A3L6 582 aaPredicted RBP14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 FAM149AA5PLN7 773 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 LMO7DNF2Z398 122 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 KRT37O76014 449 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 NEBLO76041 1014 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 CPP00450 1065 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 GP1BAP07359 652 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 JUPP14923 745 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 CES1P23141 567 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 KDELR1P24390 212 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 HTR1BP28222 390 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 MAXP61244 160 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 SEMG2Q02383 582 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 PPARDQ03181 441 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 TRAF2Q12933 501 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 INPP5AQ14642 412 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 HES3Q5TGS1 186 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 LRRC38Q5VT99 294 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 RBFAQ8N0V3 343 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 TC2NQ8N9U0 490 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 ATL2Q8NHH9 583 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 LMX1AQ8TE12 382 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 RAPGEF5Q92565 580 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 HDAC11Q96DB2 347 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 RNF157Q96PX1 679 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 ANP32EQ9BTT0 268 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 APOOQ9BUR5 198 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 LRRC61Q9BV99 259 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 SLC13A1Q9BZW2 595 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 POLR1EQ9GZS1 481 aaKnown RBP14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 NT5MQ9NPB1 228 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 B4GALT6Q9UBX8 382 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 SALL4Q9UJQ4 1053 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 PNMA8BQ9ULN7 279 aaPredicted RBP14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 PPIL1Q9Y3C6 166 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 U3KQA8 63 aa14.93□□□□□ -0.02
SMIM11A-203ENST00000399299 LRRD1A4D1F6 860 aa14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 SRRM3A6NNA2 597 aaPredicted RBP14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 PSMD11O00231 422 aa14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 PGLSO95336 258 aa14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 HOXC4P09017 264 aaPredicted RBP14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 CYP2A6P11509 494 aaPredicted RBP14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 GM2AP17900 193 aa14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 VIPR1P32241 457 aa14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 SLC1A1P43005 524 aa14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 HK3P52790 923 aa14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 HADHBP55084 474 aaKnown RBP14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 CNGA3Q16281 694 aa14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 PRRT3Q5FWE3 981 aa14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 ZFYVE27Q5T4F4 411 aa14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 ARMC12Q5T9G4 340 aa14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 ESRP1Q6NXG1 681 aaKnown RBP14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 SDR16C5Q8N3Y7 309 aa14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 PDCD6IPQ8WUM4 868 aaKnown RBP14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 SCRN2Q96FV2 425 aa14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 COQ10AQ96MF6 247 aa14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 WDR92Q96MX6 357 aa14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 MCCC1Q96RQ3 725 aaPredicted RBP14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 IL12RB2Q99665 862 aa14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 SEMA3CQ99985 751 aa14.92□□□□□ -0.02
SMIM11A-203ENST00000399299 BOCQ9BWV1 1114 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms