RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 BTG3Q14201 252 aaPredicted RBP9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 RGS21Q2M5E4 152 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 PDCD4Q53EL6 469 aaKnown RBP9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 TMEM214Q6NUQ4 689 aaKnown RBP9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 C4orf22Q6V702 233 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 CENPLQ8N0S6 344 aaPredicted RBP9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 IPMKQ8NFU5 416 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 HMGCLL1Q8TB92 370 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 ING2Q9H160 280 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 EPS8L2Q9H6S3 715 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 TBCCD1Q9NVR7 557 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 GID8Q9NWU2 228 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 NCKIPSDQ9NZQ3 722 aa9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 ZNF214Q9UL59 606 aaPredicted RBP9.94□□□□□ -0.82
PTCHD4-202ENST00000398738 DOCK5Q9H7D0 1870 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 EEF2KO00418 725 aaKnown RBP9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 SUPT7LO94864 414 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 BMP10O95393 424 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 IL10P22301 178 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 NDUFV1P49821 464 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 NSUN2Q08J23 767 aaKnown RBP eCLIP9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 PPP1R8Q12972 351 aaKnown RBP9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 SPIDRQ14159 915 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 RPS6KA2Q15349 733 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 PGS1Q32NB8 556 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 NBPF12Q5TAG4 269 aaPredicted RBP9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 FAM160B1Q5W0V3 765 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 CAMK1DQ8IU85 385 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 EPHX4Q8IUS5 362 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 TMEM126BQ8IUX1 230 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 PSTKQ8IV42 348 aaKnown RBP9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 SPPL2BQ8TCT7 592 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 HM13Q8TCT9 377 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 HEXDCQ8WVB3 486 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 HPS1Q92902 700 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 PPP1R14BQ96C90 147 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 HERC2P3Q9BVR0 1158 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 CCDC90BQ9GZT6 254 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 KLHL25Q9H0H3 589 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 LTB4R2Q9NPC1 389 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 EVLQ9UI08 416 aaPredicted RBP9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 WDR37Q9Y2I8 494 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 CCL22O00626 93 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 FARP2O94887 1054 aaPredicted RBP9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 MT-CYBP00156 380 aaPredicted RBP9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 PGK1P00558 417 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 STMN1P16949 149 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 LMO2P25791 158 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 HMGB2P26583 209 aaKnown RBP9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 ALDH4A1P30038 563 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 CXCR3P49682 368 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 BCAT1P54687 386 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 TPD52P55327 224 aaPredicted RBP9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 TAS2R39P59534 338 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 DNASE1L3Q13609 305 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 LAMC2Q13753 1193 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 SAMD4BQ5PRF9 694 aaKnown RBP9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 C6orf10Q5SRN2 563 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 ANKRD26P1Q6NSI1 321 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 MAMDC4Q6UXC1 1216 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 CLEC14AQ86T13 490 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 LDB1Q86U70 411 aaPredicted RBP9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 CMTR2Q8IYT2 770 aaKnown RBP9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 OR2T34Q8NGX1 318 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 OR2T3Q8NH03 318 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 SEPT1Q8WYJ6 367 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 TANKQ92844 425 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 SLC35B4Q969S0 331 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 TAMM41Q96BW9 452 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 TEX13BQ9BXU2 312 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 NIFKQ9BYG3 293 aaKnown RBP9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 POLE4Q9NR33 117 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 MAP3K20Q9NYL2 800 aaKnown RBP9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 SCHIP1Q9P0W5 487 aaPredicted RBP9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 VTI1BQ9UEU0 232 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 SLC2A6Q9UGQ3 507 aa9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 MTF2Q9Y483 593 aaPredicted RBP9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 MAGED1Q9Y5V3 778 aaPredicted RBP9.93□□□□□ -0.82
PTCHD4-202ENST00000398738 CEP350Q5VT06 3117 aa9.92□□□□□ -0.82
PTCHD4-202ENST00000398738 FAM95CA0A1B0GW59 222 aa9.92□□□□□ -0.82
PTCHD4-202ENST00000398738 CLDN5O00501 218 aa9.92□□□□□ -0.82
PTCHD4-202ENST00000398738 IGHA2P01877 340 aa9.92□□□□□ -0.82
PTCHD4-202ENST00000398738 CCNA2P20248 432 aa9.92□□□□□ -0.82
PTCHD4-202ENST00000398738 FASP25445 335 aa9.92□□□□□ -0.82
PTCHD4-202ENST00000398738 PTPN3P26045 913 aa9.92□□□□□ -0.82
PTCHD4-202ENST00000398738 POLR2IP36954 125 aaKnown RBP9.92□□□□□ -0.82
PTCHD4-202ENST00000398738 STX1BP61266 288 aa9.92□□□□□ -0.82
PTCHD4-202ENST00000398738 TUBA4AP68366 448 aa9.92□□□□□ -0.82
PTCHD4-202ENST00000398738 SLC12A1Q13621 1099 aa9.92□□□□□ -0.82
PTCHD4-202ENST00000398738 LRP8Q14114 963 aa9.92□□□□□ -0.82
PTCHD4-202ENST00000398738 MXD4Q14582 209 aaPredicted RBP9.92□□□□□ -0.82
PTCHD4-202ENST00000398738 TARBP2Q15633 366 aaKnown RBP9.92□□□□□ -0.82
PTCHD4-202ENST00000398738 IMPG1Q17R60 797 aa9.92□□□□□ -0.82
PTCHD4-202ENST00000398738 GJC2Q5T442 439 aaPredicted RBP9.92□□□□□ -0.82
PTCHD4-202ENST00000398738 LDLRAD1Q5T700 205 aa9.92□□□□□ -0.82
PTCHD4-202ENST00000398738 ZNF618Q5T7W0 954 aa9.92□□□□□ -0.82
PTCHD4-202ENST00000398738 ESRP1Q6NXG1 681 aaKnown RBP9.92□□□□□ -0.82
PTCHD4-202ENST00000398738 XRRA1Q6P2D8 792 aa9.92□□□□□ -0.82
PTCHD4-202ENST00000398738 PRR23BQ6ZRT6 265 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms