RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 RINLQ6ZS11 566 aa12.49□□□□□ -0.41
SOCS6-201ENST00000397942 SIGLEC10Q96LC7 697 aa12.49□□□□□ -0.41
SOCS6-201ENST00000397942 RNF39Q9H2S5 420 aa12.49□□□□□ -0.41
SOCS6-201ENST00000397942 SLC17A6Q9P2U8 582 aa12.49□□□□□ -0.41
SOCS6-201ENST00000397942 NALCNQ8IZF0 1738 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.48□□□□□ -0.41
SOCS6-201ENST00000397942 KPNA3O00505 521 aaPredicted RBP12.48□□□□□ -0.41
SOCS6-201ENST00000397942 TIPRLO75663 272 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 VAV1P15498 845 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 DGKAP23743 735 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 PIK3CGP48736 1102 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 DUSP4Q13115 394 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 ARHGAP36Q6ZRI8 547 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 MPP5Q8N3R9 675 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 PPM1MQ96MI6 270 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 YME1L1Q96TA2 773 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 TCF12Q99081 682 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 C3orf18Q9UK00 162 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 TIMM22Q9Y584 194 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 SLIT2O94813 1529 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 IVDP26440 423 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 SERPINA4P29622 427 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 ADSLP30566 484 aaPredicted RBP12.48□□□□□ -0.41
SOCS6-201ENST00000397942 GRIK3Q13003 919 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 RBM44Q6ZP01 1051 aaKnown RBP12.48□□□□□ -0.41
SOCS6-201ENST00000397942 ANKS3Q6ZW76 656 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 ZNF276Q8N554 614 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 HBEGFQ99075 208 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 SPATA16Q9BXB7 569 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 MTIF3Q9H2K0 278 aaKnown RBP12.48□□□□□ -0.41
SOCS6-201ENST00000397942 NOL11Q9H8H0 719 aaKnown RBP12.48□□□□□ -0.41
SOCS6-201ENST00000397942 MIEF1Q9NQG6 463 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 H2AFY2Q9P0M6 372 aaPredicted RBP12.48□□□□□ -0.41
SOCS6-201ENST00000397942 IGSF9Q9P2J2 1179 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 SF3B1O75533 1304 aaKnown RBP eCLIP12.48□□□□□ -0.418e-6■■■■■ 107
SOCS6-201ENST00000397942 A0A0J9YYE9 177 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 PPEF2O14830 753 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 ABCB1P08183 1280 aaPredicted RBP12.48□□□□□ -0.41
SOCS6-201ENST00000397942 PBLDP30039 288 aaPredicted RBP12.48□□□□□ -0.41
SOCS6-201ENST00000397942 IDH2P48735 452 aaKnown RBP12.48□□□□□ -0.41
SOCS6-201ENST00000397942 ADARP55265 1226 aaKnown RBP12.48□□□□□ -0.41
SOCS6-201ENST00000397942 TPGS1Q6ZTW0 290 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 ADHFE1Q8IWW8 467 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 ZDHHC14Q8IZN3 488 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 ACTRT2Q8TDY3 377 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 OSBPL11Q9BXB4 747 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 XYLT2Q9H1B5 865 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 KCNU1A8MYU2 1149 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 STAU1O95793 577 aaKnown RBP12.48□□□□□ -0.41
SOCS6-201ENST00000397942 OR1D2P34982 312 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 ATP1A4Q13733 1029 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 DENND1CQ8IV53 801 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 PGAM4Q8N0Y7 254 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 STX19Q8N4C7 294 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 CNTD1Q8N815 330 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 SPPL2BQ8TCT7 592 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 BTN2A3PQ96KV6 586 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 SLC25A51Q9H1U9 297 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 GBA3Q9H227 469 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 PIGVQ9NUD9 493 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 DNMT3LQ9UJW3 386 aa12.48□□□□□ -0.41
SOCS6-201ENST00000397942 PKMP14618 531 aaKnown RBP12.47□□□□□ -0.41
SOCS6-201ENST00000397942 SLC25A11Q02978 314 aaKnown RBP12.47□□□□□ -0.41
SOCS6-201ENST00000397942 GALNT3Q14435 633 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 PABPC1LQ4VXU2 614 aaKnown RBP12.47□□□□□ -0.41
SOCS6-201ENST00000397942 HECTD2Q5U5R9 776 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 MRPL9Q9BYD2 267 aaKnown RBP12.47□□□□□ -0.41
SOCS6-201ENST00000397942 AGO1Q9UL18 857 aaKnown RBP12.47□□□□□ -0.41
SOCS6-201ENST00000397942 IGSF6O95976 241 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 ANXA6P08133 673 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 CCNCP24863 283 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 RABGGTBP53611 331 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 SLC5A3P53794 718 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 PRKD1Q15139 912 aaPredicted RBP12.47□□□□□ -0.41
SOCS6-201ENST00000397942 FAM187BQ17R55 369 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 SETD9Q8NE22 299 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 SLC35F5Q8WV83 523 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 SNX27Q96L92 541 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 TPRKBQ9Y3C4 175 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 APC2O95996 2303 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 H3BMM5 538 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 RGS20O76081 388 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 CHRNGP07510 517 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 GSTM1P09488 218 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 OR56A5P0C7T3 313 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 IDO1P14902 403 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 PAX3P23760 479 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 RPL38P63173 70 aaKnown RBP12.47□□□□□ -0.41
SOCS6-201ENST00000397942 ARHGAP15Q53QZ3 475 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 YAF2Q8IY57 180 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 PPP3R2Q96LZ3 170 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 TSPAN18Q96SJ8 248 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 CCDC28BQ9BUN5 200 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 FADS3Q9Y5Q0 445 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 ARHGEF9O43307 516 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 NDST3O95803 873 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 IFNA14P01570 189 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 SMPD1P17405 629 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 FLT3LGP49771 235 aa12.47□□□□□ -0.41
SOCS6-201ENST00000397942 CNTN1Q12860 1018 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms