RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 A0A1B0GTL3 188 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 CASTOR2A6NHX0 329 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 SLC25A27O95847 323 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 HLA-DQB2P05538 268 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 ATP5F1P24539 256 aaPredicted RBP13.81□□□□□ -0.2
COL6A2-203ENST00000397763 STX5Q13190 355 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 SEMA3BQ13214 749 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 CYHR1Q6ZMK1 362 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 ATPAF2Q8N5M1 289 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 HDAC11Q96DB2 347 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 MAML3Q96JK9 1138 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 INIPQ9NRY2 104 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 FAIMQ9NVQ4 179 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 FNDC3AQ9Y2H6 1198 aaKnown RBP13.81□□□□□ -0.2
COL6A2-203ENST00000397763 TRAF6Q9Y4K3 522 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 MAGEB16A2A368 324 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 H3BMM5 538 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 GPR32O75388 356 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 CD247P20963 164 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 NR4A1P22736 598 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 RXRGP48443 463 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 ZIK1Q3SY52 487 aaPredicted RBP13.81□□□□□ -0.2
COL6A2-203ENST00000397763 C1QTNF12Q5T7M4 302 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 BBS5Q8N3I7 341 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 PPHLN1Q8NEY8 458 aaKnown RBP13.81□□□□□ -0.2
COL6A2-203ENST00000397763 ESAMQ96AP7 390 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 VPS33AQ96AX1 596 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 ISOC1Q96CN7 298 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 SLC2A13Q96QE2 648 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 SLC39A8Q9C0K1 460 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 TBC1D23Q9NUY8 699 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 VPS28Q9UK41 221 aa13.81□□□□□ -0.2
COL6A2-203ENST00000397763 NRCAMQ92823 1304 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 A0A0G2JLL6 359 aaPredicted RBP13.8□□□□□ -0.2
COL6A2-203ENST00000397763 SH3PXD2BA1X283 911 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 NME4O00746 187 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 TRIM24O15164 1050 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 OCM2P0CE71 109 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 OCMP0CE72 109 aaPredicted RBP13.8□□□□□ -0.2
COL6A2-203ENST00000397763 BNIP3Q12983 259 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 KYAT1Q16773 422 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 ARL13BQ3SXY8 428 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 TMEM207Q6UWW9 146 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 ALKAL1Q6UXT8 129 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 PRRT2Q7Z6L0 340 aaPredicted RBP13.8□□□□□ -0.2
COL6A2-203ENST00000397763 SHCBP1Q8NEM2 672 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 OR6J1Q8NGC5 347 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 PPTC7Q8NI37 304 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 SENP8Q96LD8 212 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 ZNF560Q96MR9 790 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 SEPHS2Q99611 448 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 MRPL57Q9BQC6 102 aaKnown RBP13.8□□□□□ -0.2
COL6A2-203ENST00000397763 OSBPL11Q9BXB4 747 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 TRNAU1APQ9NX07 287 aaKnown RBP13.8□□□□□ -0.2
COL6A2-203ENST00000397763 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.8□□□□□ -0.2
COL6A2-203ENST00000397763 OAZ3Q9UMX2 235 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 IPPQ9Y573 584 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 IPO13O94829 963 aaKnown RBP13.8□□□□□ -0.2
COL6A2-203ENST00000397763 ATE1O95260 518 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 LINC00032P0C843 101 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 PRSS56P0CW18 603 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 RABL3Q5HYI8 236 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 ELMSAN1Q6PJG2 1045 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 PIWIL4Q7Z3Z4 852 aaKnown RBP13.8□□□□□ -0.2
COL6A2-203ENST00000397763 EPHX4Q8IUS5 362 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 C3orf58Q8NDZ4 430 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 RDH11Q8TC12 318 aa13.8□□□□□ -0.2
COL6A2-203ENST00000397763 MARCH4Q9P2E8 410 aaPredicted RBP13.8□□□□□ -0.2
COL6A2-203ENST00000397763 NCF1BA6NI72 391 aaPredicted RBP13.79□□□□□ -0.2
COL6A2-203ENST00000397763 NCF1CA8MVU1 366 aaPredicted RBP13.79□□□□□ -0.2
COL6A2-203ENST00000397763 SLCO1B7G3V0H7 640 aa13.79□□□□□ -0.2
COL6A2-203ENST00000397763 TREHO43280 583 aa13.79□□□□□ -0.2
COL6A2-203ENST00000397763 ZBTB11O95625 1053 aaPredicted RBP13.79□□□□□ -0.2
COL6A2-203ENST00000397763 CD4P01730 458 aa13.79□□□□□ -0.2
COL6A2-203ENST00000397763 NCF1P14598 390 aaPredicted RBP13.79□□□□□ -0.2
COL6A2-203ENST00000397763 RPL34P49207 117 aaKnown RBP13.79□□□□□ -0.2
COL6A2-203ENST00000397763 ARSDP51689 593 aa13.79□□□□□ -0.2
COL6A2-203ENST00000397763 CDKN2DP55273 166 aa13.79□□□□□ -0.2
COL6A2-203ENST00000397763 NCCRP1Q6ZVX7 275 aaPredicted RBP13.79□□□□□ -0.2
COL6A2-203ENST00000397763 AKTIPQ9H8T0 292 aa13.79□□□□□ -0.2
COL6A2-203ENST00000397763 SUCOQ9UBS9 1254 aaKnown RBP13.79□□□□□ -0.2
COL6A2-203ENST00000397763 TRHDEQ9UKU6 1024 aa13.79□□□□□ -0.2
COL6A2-203ENST00000397763 TIMM22Q9Y584 194 aa13.79□□□□□ -0.2
COL6A2-203ENST00000397763 A0A0J9YYE9 177 aa13.79□□□□□ -0.2
COL6A2-203ENST00000397763 INPP4BO15327 924 aa13.79□□□□□ -0.2
COL6A2-203ENST00000397763 SLC7A1P30825 629 aa13.79□□□□□ -0.2
COL6A2-203ENST00000397763 CLCNKBP51801 687 aa13.79□□□□□ -0.2
COL6A2-203ENST00000397763 NUP107P57740 925 aa13.79□□□□□ -0.2
COL6A2-203ENST00000397763 HERC3Q15034 1050 aa13.79□□□□□ -0.2
COL6A2-203ENST00000397763 SV2CQ496J9 727 aa13.79□□□□□ -0.2
COL6A2-203ENST00000397763 NHSL2Q5HYW2 709 aa13.79□□□□□ -0.2
COL6A2-203ENST00000397763 OTUD3Q5T2D3 398 aaPredicted RBP13.79□□□□□ -0.2
COL6A2-203ENST00000397763 TMEM26Q6ZUK4 368 aa13.79□□□□□ -0.2
COL6A2-203ENST00000397763 PBXIP1Q96AQ6 731 aa13.79□□□□□ -0.2
COL6A2-203ENST00000397763 MAELQ96JY0 434 aaKnown RBP13.79□□□□□ -0.2
COL6A2-203ENST00000397763 GAD1Q99259 594 aa13.79□□□□□ -0.2
COL6A2-203ENST00000397763 CLK4Q9HAZ1 481 aaKnown RBP13.79□□□□□ -0.2
COL6A2-203ENST00000397763 GLOD4Q9HC38 313 aa13.79□□□□□ -0.2
COL6A2-203ENST00000397763 PNPLA3Q9NST1 481 aa13.79□□□□□ -0.2
COL6A2-203ENST00000397763 SLAMF8Q9P0V8 285 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms