RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 SPON1Q9HCB6 807 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 ARMC1Q9NVT9 282 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 RIMS3Q9UJD0 308 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 SMIM35A0A1B0GVV1 85 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 CYB561D2O14569 222 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 LGALS2P05162 132 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 ITGAXP20702 1163 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 GRIA3P42263 894 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 ALDH3B2P48448 385 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 CCT3P49368 545 aaKnown RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 SNX17Q15036 470 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 UGT2A3Q6UWM9 527 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 GALNT13Q8IUC8 556 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 SMAD5Q99717 465 aaKnown RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 HOPXQ9BPY8 73 aaPredicted RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 THUMPD3Q9BV44 507 aaKnown RBP5.48□□□□□ -1.53
PTPRD-205ENST00000397611 ZNF221Q9UK13 617 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 GJA3Q9Y6H8 435 aa5.48□□□□□ -1.53
PTPRD-205ENST00000397611 TCAF2A6NFQ2 919 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 GABRDO14764 452 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 CCNKO75909 580 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 OR6B1O95007 311 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 ARIH2O95376 493 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 NADKO95544 446 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 ZNF12P17014 697 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 NR4A1P22736 598 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 CCNCP24863 283 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 PIK3R1P27986 724 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 ABCG1P45844 678 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 GEMP55040 296 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 DCLRE1AQ6PJP8 1040 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 EEPD1Q7L9B9 569 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 HDDC2Q7Z4H3 204 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 C8orf59Q8N0T1 100 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 GPC2Q8N158 579 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 FAM84AQ96KN4 292 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 BIRC8Q96P09 236 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 TCF12Q99081 682 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 FBXO5Q9UKT4 447 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 PNMA8BQ9ULN7 279 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 VPS9D1Q9Y2B5 631 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 GPC6Q9Y625 555 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 A0A0G2JLL6 359 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 PSMD12O00232 456 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 VPS4BO75351 444 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 GPIP06744 558 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 CLCN3P51790 818 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 ARHGAP1Q07960 439 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 FAM83EQ2M2I3 478 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 C15orf59Q2T9L4 293 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 TJAP1Q5JTD0 557 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 CHADLQ6NUI6 762 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 PRRT2Q7Z6L0 340 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 BPIFB6Q8NFQ5 453 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 ZUFSPQ96AP4 578 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 MINDY3Q9H8M7 445 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 VANGL2Q9ULK5 521 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 RBBP6Q7Z6E9 1792 aaKnown RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 G3V2L1 256 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 EEF2KO00418 725 aaKnown RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 ACOT8O14734 319 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 TNPO2O14787 897 aaKnown RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 SPTLC1O15269 473 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 TSPAN1O60635 241 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 CRTAMO95727 393 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 SLC2A3P11169 496 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 HSD17B1P14061 328 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 NPR3P17342 541 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 IDH3AP50213 366 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 FSTL4Q6MZW2 842 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 KLHL17Q6TDP4 642 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 CES3Q6UWW8 571 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 ENKURQ8TC29 256 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 FAR1Q8WVX9 515 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 RSPH1Q8WYR4 309 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 KIF12Q96FN5 646 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 EBF4Q9BQW3 602 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 NUSAP1Q9BXS6 441 aaKnown RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 ABHD16BQ9H3Z7 469 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 EPS8L2Q9H6S3 715 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 NOL11Q9H8H0 719 aaKnown RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 DIABLOQ9NR28 239 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 USE1Q9NZ43 259 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 AFF4Q9UHB7 1163 aaKnown RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 PSME4Q14997 1843 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 STX7O15400 261 aaKnown RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 MATN4O95460 622 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 FGF4P08620 206 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 DBTP11182 482 aaKnown RBP5.47□□□□□ -1.53
PTPRD-205ENST00000397611 LHX1P48742 406 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 SEPHS1P49903 392 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 NAGLUP54802 743 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 COPZ1P61923 177 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 MPP1Q00013 466 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 PLCL1Q15111 1095 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 GOLGA7BQ2TAP0 167 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 SEZ6Q53EL9 994 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 TMC7Q7Z402 723 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 MPP5Q8N3R9 675 aa5.47□□□□□ -1.53
PTPRD-205ENST00000397611 URGCPQ8TCY9 931 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms