RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 EXOC1LA0A1B0GW35 172 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 USP1O94782 785 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 ABHD2P08910 425 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 GLULP15104 373 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 ZNF844Q08AG5 666 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 CNGA3Q16281 694 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 SKIDA1Q1XH10 827 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 KBTBD12Q3ZCT8 623 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 STEAP4Q687X5 459 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 IL17RCQ8NAC3 791 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 TXNDC5Q8NBS9 432 aaKnown RBP21.27■■□□□ 1
CPNE1-204ENST00000397443 PIP4K2CQ8TBX8 421 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 BRSK1Q8TDC3 778 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 ECHDC3Q96DC8 303 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 SLC17A6Q9P2U8 582 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 FBXL21Q9UKT6 434 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 A0A0J9YYE9 177 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 ZCWPW2A0A1B0GU75 182 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 GOLGA8CPA6NN73 597 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 PLK4O00444 970 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 LDB2O43679 373 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 SYNCRIPO60506 623 aaKnown RBP21.27■■□□□ 1
CPNE1-204ENST00000397443 TRBC1P01850 177 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 PRNPP04156 253 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 ERVK-10P10266 1014 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 HNF1BP35680 557 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 SPANXN3Q5MJ09 141 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 SDE2Q6IQ49 451 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 CTAGE3PQ8IX95 158 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 OR13C4Q8NGS5 318 aa21.27■■□□□ 1
CPNE1-204ENST00000397443 FNDC3AQ9Y2H6 1198 aaKnown RBP21.27■■□□□ 1
CPNE1-204ENST00000397443 BPTFQ12830 3046 aa21.26■□□□□ 0.99
CPNE1-204ENST00000397443 AGPSO00116 658 aa21.26■□□□□ 0.99
CPNE1-204ENST00000397443 SPAG6O75602 509 aa21.26■□□□□ 0.99
CPNE1-204ENST00000397443 NTSR1P30989 418 aa21.26■□□□□ 0.99
CPNE1-204ENST00000397443 STX2P32856 288 aa21.26■□□□□ 0.99
CPNE1-204ENST00000397443 PSMD8P48556 350 aa21.26■□□□□ 0.99
CPNE1-204ENST00000397443 KRT71Q3SY84 523 aa21.26■□□□□ 0.99
CPNE1-204ENST00000397443 ZNF805Q5CZA5 627 aa21.26■□□□□ 0.99
CPNE1-204ENST00000397443 TSTD2Q5T7W7 516 aa21.26■□□□□ 0.99
CPNE1-204ENST00000397443 KIAA1211LQ6NV74 962 aa21.26■□□□□ 0.99
CPNE1-204ENST00000397443 LYSMD3Q7Z3D4 306 aa21.26■□□□□ 0.99
CPNE1-204ENST00000397443 RPLP0P6Q8NHW5 317 aa21.26■□□□□ 0.99
CPNE1-204ENST00000397443 DNAJC1Q96KC8 554 aaKnown RBP21.26■□□□□ 0.99
CPNE1-204ENST00000397443 OSBPL1AQ9BXW6 950 aa21.26■□□□□ 0.99
CPNE1-204ENST00000397443 GPR63Q9BZJ6 419 aa21.26■□□□□ 0.99
CPNE1-204ENST00000397443 BPIFA1Q9NP55 256 aa21.26■□□□□ 0.99
CPNE1-204ENST00000397443 C20orf96Q9NUD7 363 aaPredicted RBP21.26■□□□□ 0.99
CPNE1-204ENST00000397443 POLR3BQ9NW08 1133 aaPredicted RBP21.26■□□□□ 0.99
CPNE1-204ENST00000397443 PPM1HQ9ULR3 514 aa21.26■□□□□ 0.99
CPNE1-204ENST00000397443 PHTF1Q9UMS5 762 aa21.26■□□□□ 0.99
CPNE1-204ENST00000397443 C16orf96A6NNT2 1141 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 CXorf49A8MYA2 514 aaPredicted RBP21.25■□□□□ 0.99
CPNE1-204ENST00000397443 VAPBO95292 243 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 CRTAMO95727 393 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 F7P08709 466 aaPredicted RBP21.25■□□□□ 0.99
CPNE1-204ENST00000397443 TSHRP16473 764 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 RPL26P61254 145 aaKnown RBP21.25■□□□□ 0.99
CPNE1-204ENST00000397443 ENPP2Q13822 863 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 BRAT1Q6PJG6 821 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 TTC7BQ86TV6 843 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 TSPAN33Q86UF1 283 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 PTCD2Q8WV60 388 aaKnown RBP21.25■□□□□ 0.99
CPNE1-204ENST00000397443 RANBP9Q96S59 729 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 CCDC77Q9BR77 488 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 ACSS3Q9H6R3 686 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 ARHGEF3Q9NR81 526 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 RPL26L1Q9UNX3 145 aaKnown RBP21.25■□□□□ 0.99
CPNE1-204ENST00000397443 ZNF711Q9Y462 761 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 FAM169AQ9Y6X4 670 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 C1orf232A0A0U1RR37 186 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 MROH6A6NGR9 719 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 NPIPB15A6NHN6 443 aaPredicted RBP21.25■□□□□ 0.99
CPNE1-204ENST00000397443 C2orf81A6NN90 581 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 ADAM23O75077 832 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 XPAP23025 273 aaPredicted RBP21.25■□□□□ 0.99
CPNE1-204ENST00000397443 UGP2Q16851 508 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 LRIG3Q6UXM1 1119 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 ZNF852Q6ZMS4 543 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 USP45Q70EL2 814 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 PARS2Q7L3T8 475 aaKnown RBP21.25■□□□□ 0.99
CPNE1-204ENST00000397443 PPM1NQ8N819 430 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 CERS2Q96G23 380 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 LRIG1Q96JA1 1093 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 CYTH2Q99418 400 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 ACBD3Q9H3P7 528 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 MRM3Q9HC36 420 aaKnown RBP21.25■□□□□ 0.99
CPNE1-204ENST00000397443 SMYD2Q9NRG4 433 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 TREX1Q9NSU2 369 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 CTNNAL1Q9UBT7 734 aa21.25■□□□□ 0.99
CPNE1-204ENST00000397443 CAPN8A6NHC0 703 aa21.24■□□□□ 0.99
CPNE1-204ENST00000397443 NPC1O15118 1278 aa21.24■□□□□ 0.99
CPNE1-204ENST00000397443 ATP8B1O43520 1251 aa21.24■□□□□ 0.99
CPNE1-204ENST00000397443 CLDN7O95471 211 aa21.24■□□□□ 0.99
CPNE1-204ENST00000397443 GSTA2P09210 222 aa21.24■□□□□ 0.99
CPNE1-204ENST00000397443 CHRM1P11229 460 aaPredicted RBP21.24■□□□□ 0.99
CPNE1-204ENST00000397443 HOXB2P14652 356 aa21.24■□□□□ 0.99
CPNE1-204ENST00000397443 ARSDP51689 593 aa21.24■□□□□ 0.99
CPNE1-204ENST00000397443 EIF3BP55884 814 aaKnown RBP21.24■□□□□ 0.99
CPNE1-204ENST00000397443 POLR2LP62875 67 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms