RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 FAM118BQ9BPY3 351 aa25.5■■□□□ 1.67
TSPAN4-207ENST00000397411 RTKNQ9BST9 563 aa25.5■■□□□ 1.67
TSPAN4-207ENST00000397411 SLC25A51Q9H1U9 297 aa25.5■■□□□ 1.67
TSPAN4-207ENST00000397411 GLOD4Q9HC38 313 aa25.5■■□□□ 1.67
TSPAN4-207ENST00000397411 GDF3Q9NR23 364 aa25.5■■□□□ 1.67
TSPAN4-207ENST00000397411 COQ6Q9Y2Z9 468 aa25.5■■□□□ 1.67
TSPAN4-207ENST00000397411 PCDH15Q96QU1 1955 aa25.49■■□□□ 1.67
TSPAN4-207ENST00000397411 RBP3P10745 1247 aa25.49■■□□□ 1.67
TSPAN4-207ENST00000397411 CTPS1P17812 591 aa25.49■■□□□ 1.67
TSPAN4-207ENST00000397411 PUM1Q14671 1186 aaKnown RBP eCLIP25.49■■□□□ 1.67
TSPAN4-207ENST00000397411 FAM174AQ8TBP5 190 aa25.49■■□□□ 1.67
TSPAN4-207ENST00000397411 TEKT5Q96M29 485 aa25.49■■□□□ 1.67
TSPAN4-207ENST00000397411 KCNF1Q9H3M0 494 aa25.49■■□□□ 1.67
TSPAN4-207ENST00000397411 PCDH9Q9HC56 1237 aa25.49■■□□□ 1.67
TSPAN4-207ENST00000397411 B4GALT6Q9UBX8 382 aa25.49■■□□□ 1.67
TSPAN4-207ENST00000397411 KNL1Q8NG31 2342 aa25.48■■□□□ 1.67
TSPAN4-207ENST00000397411 CFAP69A5D8W1 941 aa25.48■■□□□ 1.67
TSPAN4-207ENST00000397411 A6NNZ2 444 aa25.48■■□□□ 1.67
TSPAN4-207ENST00000397411 DFNA5O60443 496 aa25.48■■□□□ 1.67
TSPAN4-207ENST00000397411 PDHA1P08559 390 aa25.48■■□□□ 1.67
TSPAN4-207ENST00000397411 THEGLP0DJG4 465 aa25.48■■□□□ 1.67
TSPAN4-207ENST00000397411 C6P13671 934 aa25.48■■□□□ 1.67
TSPAN4-207ENST00000397411 RBL1P28749 1068 aa25.48■■□□□ 1.67
TSPAN4-207ENST00000397411 VIPR1P32241 457 aa25.48■■□□□ 1.67
TSPAN4-207ENST00000397411 CTSKP43235 329 aa25.48■■□□□ 1.67
TSPAN4-207ENST00000397411 SKOR1P84550 965 aa25.48■■□□□ 1.67
TSPAN4-207ENST00000397411 ARHGEF7Q14155 803 aa25.48■■□□□ 1.67
TSPAN4-207ENST00000397411 DENND2CQ68D51 928 aa25.48■■□□□ 1.67
TSPAN4-207ENST00000397411 CCDC70Q6NSX1 233 aa25.48■■□□□ 1.67
TSPAN4-207ENST00000397411 PTAR1Q7Z6K3 402 aaPredicted RBP25.48■■□□□ 1.67
TSPAN4-207ENST00000397411 TMEM145Q8NBT3 493 aa25.48■■□□□ 1.67
TSPAN4-207ENST00000397411 LPCAT1Q8NF37 534 aa25.48■■□□□ 1.67
TSPAN4-207ENST00000397411 IMP4Q96G21 291 aaKnown RBP25.48■■□□□ 1.67
TSPAN4-207ENST00000397411 ADGRE3Q9BY15 652 aa25.48■■□□□ 1.67
TSPAN4-207ENST00000397411 C10orf88Q9H8K7 445 aa25.48■■□□□ 1.67
TSPAN4-207ENST00000397411 TRHDEQ9UKU6 1024 aa25.48■■□□□ 1.67
TSPAN4-207ENST00000397411 GOLGA8CPA6NN73 597 aa25.47■■□□□ 1.67
TSPAN4-207ENST00000397411 H0Y8X5 98 aa25.47■■□□□ 1.67
TSPAN4-207ENST00000397411 RAD51BO15315 384 aa25.47■■□□□ 1.67
TSPAN4-207ENST00000397411 TNNT3P45378 269 aaPredicted RBP25.47■■□□□ 1.67
TSPAN4-207ENST00000397411 WASHC5Q12768 1159 aa25.47■■□□□ 1.67
TSPAN4-207ENST00000397411 LRRC14Q15048 493 aa25.47■■□□□ 1.67
TSPAN4-207ENST00000397411 ACOX1Q15067 660 aa25.47■■□□□ 1.67
TSPAN4-207ENST00000397411 LIPIQ6XZB0 460 aa25.47■■□□□ 1.67
TSPAN4-207ENST00000397411 Q6ZSR6 202 aa25.47■■□□□ 1.67
TSPAN4-207ENST00000397411 KDELC2Q7Z4H8 507 aa25.47■■□□□ 1.67
TSPAN4-207ENST00000397411 DENND6BQ8NEG7 585 aa25.47■■□□□ 1.67
TSPAN4-207ENST00000397411 PIH1D2Q8WWB5 315 aa25.47■■□□□ 1.67
TSPAN4-207ENST00000397411 SPOCK2Q92563 424 aa25.47■■□□□ 1.67
TSPAN4-207ENST00000397411 IFT43Q96FT9 208 aa25.47■■□□□ 1.67
TSPAN4-207ENST00000397411 SCRN2Q96FV2 425 aa25.47■■□□□ 1.67
TSPAN4-207ENST00000397411 TDRD1Q9BXT4 1180 aaKnown RBP25.47■■□□□ 1.67
TSPAN4-207ENST00000397411 IL21RQ9HBE5 538 aa25.47■■□□□ 1.67
TSPAN4-207ENST00000397411 DNAAF2Q9NVR5 837 aaKnown RBP25.47■■□□□ 1.67
TSPAN4-207ENST00000397411 TRMT1Q9NXH9 659 aaKnown RBP25.47■■□□□ 1.67
TSPAN4-207ENST00000397411 FRYLO94915 3013 aa25.47■■□□□ 1.67
TSPAN4-207ENST00000397411 KCNN4O15554 427 aa25.46■■□□□ 1.67
TSPAN4-207ENST00000397411 ZNF189O75820 626 aaPredicted RBP25.46■■□□□ 1.67
TSPAN4-207ENST00000397411 MMP2P08253 660 aa25.46■■□□□ 1.67
TSPAN4-207ENST00000397411 NXPH1P58417 271 aa25.46■■□□□ 1.67
TSPAN4-207ENST00000397411 RPL26P61254 145 aaKnown RBP25.46■■□□□ 1.67
TSPAN4-207ENST00000397411 PCSK7Q16549 785 aa25.46■■□□□ 1.67
TSPAN4-207ENST00000397411 PRAMEF14Q5SWL7 426 aa25.46■■□□□ 1.67
TSPAN4-207ENST00000397411 GCNT7Q6ZNI0 430 aa25.46■■□□□ 1.67
TSPAN4-207ENST00000397411 DCP2Q8IU60 420 aaKnown RBP25.46■■□□□ 1.67
TSPAN4-207ENST00000397411 ZNF567Q8N184 647 aa25.46■■□□□ 1.67
TSPAN4-207ENST00000397411 RPL26L1Q9UNX3 145 aaKnown RBP25.46■■□□□ 1.67
TSPAN4-207ENST00000397411 LRRK1Q38SD2 2015 aa25.46■■□□□ 1.67
TSPAN4-207ENST00000397411 TMEM131Q92545 1883 aa25.45■■□□□ 1.67
TSPAN4-207ENST00000397411 FZD6O60353 706 aa25.45■■□□□ 1.66
TSPAN4-207ENST00000397411 NFKB1P19838 968 aa25.45■■□□□ 1.66
TSPAN4-207ENST00000397411 KCNA4P22459 653 aa25.45■■□□□ 1.66
TSPAN4-207ENST00000397411 CCDC173Q0VFZ6 552 aa25.45■■□□□ 1.66
TSPAN4-207ENST00000397411 RALGDSQ12967 914 aa25.45■■□□□ 1.66
TSPAN4-207ENST00000397411 IHHQ14623 411 aa25.45■■□□□ 1.66
TSPAN4-207ENST00000397411 SUZ12Q15022 739 aaKnown RBP25.45■■□□□ 1.66
TSPAN4-207ENST00000397411 OR13H1Q8NG92 308 aa25.45■■□□□ 1.66
TSPAN4-207ENST00000397411 SPATA22Q8NHS9 363 aa25.45■■□□□ 1.66
TSPAN4-207ENST00000397411 CENPTQ96BT3 561 aa25.45■■□□□ 1.66
TSPAN4-207ENST00000397411 BMFQ96LC9 184 aa25.45■■□□□ 1.66
TSPAN4-207ENST00000397411 KLF6Q99612 283 aaPredicted RBP25.45■■□□□ 1.66
TSPAN4-207ENST00000397411 CARD9Q9H257 536 aa25.45■■□□□ 1.66
TSPAN4-207ENST00000397411 TM7SF3Q9NS93 570 aa25.45■■□□□ 1.66
TSPAN4-207ENST00000397411 DLL3Q9NYJ7 618 aa25.45■■□□□ 1.66
TSPAN4-207ENST00000397411 UBP1Q9NZI7 540 aa25.45■■□□□ 1.66
TSPAN4-207ENST00000397411 RSPH14Q9UHP6 348 aa25.45■■□□□ 1.66
TSPAN4-207ENST00000397411 TP53BP1Q12888 1972 aaPredicted RBP25.44■■□□□ 1.66
TSPAN4-207ENST00000397411 DCDC2BA2VCK2 349 aa25.44■■□□□ 1.66
TSPAN4-207ENST00000397411 POM121BA6NF01 834 aa25.44■■□□□ 1.66
TSPAN4-207ENST00000397411 PMPCBO75439 489 aa25.44■■□□□ 1.66
TSPAN4-207ENST00000397411 ALPIP09923 528 aa25.44■■□□□ 1.66
TSPAN4-207ENST00000397411 MSNP26038 577 aaKnown RBP25.44■■□□□ 1.66
TSPAN4-207ENST00000397411 HNF1BP35680 557 aa25.44■■□□□ 1.66
TSPAN4-207ENST00000397411 RABIFP47224 123 aa25.44■■□□□ 1.66
TSPAN4-207ENST00000397411 ARRB1P49407 418 aaPredicted RBP25.44■■□□□ 1.66
TSPAN4-207ENST00000397411 SLC14A1Q13336 389 aa25.44■■□□□ 1.66
TSPAN4-207ENST00000397411 ZNF423Q2M1K9 1284 aa25.44■■□□□ 1.66
TSPAN4-207ENST00000397411 ITPRIPL1Q6GPH6 555 aa25.44■■□□□ 1.66
TSPAN4-207ENST00000397411 KYAT3Q6YP21 454 aaKnown RBP25.44■■□□□ 1.66
TSPAN4-207ENST00000397411 ABI3BPQ7Z7G0 1075 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms