RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 ARHGAP8P85298 464 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 STAT4Q14765 748 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 USP45Q70EL2 814 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 PID1Q7Z2X4 250 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 SLC35F6Q8N357 371 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 LPCAT1Q8NF37 534 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 OR2I1PQ8NGU4 316 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 PCDH9Q9HC56 1237 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 COQ6Q9Y2Z9 468 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 JRKLQ9Y4A0 524 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 A8MX80 341 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 F5H423 210 aaPredicted RBP21.29■■□□□ 1
TSPAN4-206ENST00000397408 RAD51BO15315 384 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 ELFN1P0C7U0 828 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 CTPS1P17812 591 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 CLDN2P57739 230 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 KIF19Q2TAC6 998 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 GCNT7Q6ZNI0 430 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 SPATA22Q8NHS9 363 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 ASB12Q8WXK4 309 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 ATG4AQ8WYN0 398 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 SKA1Q96BD8 255 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 ZDHHC5Q9C0B5 715 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 TMEM9BQ9NQ34 198 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 TRHDEQ9UKU6 1024 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 ANKRD6Q9Y2G4 727 aa21.29■■□□□ 1
TSPAN4-206ENST00000397408 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.29■■□□□ 1
TSPAN4-206ENST00000397408 LRRK1Q38SD2 2015 aa21.28■■□□□ 1
TSPAN4-206ENST00000397408 NPIPB15A6NHN6 443 aaPredicted RBP21.28■■□□□ 1
TSPAN4-206ENST00000397408 H0Y8X5 98 aa21.28■■□□□ 1
TSPAN4-206ENST00000397408 STK10O94804 968 aaKnown RBP21.28■■□□□ 1
TSPAN4-206ENST00000397408 MT-CYBP00156 380 aaPredicted RBP21.28■■□□□ 1
TSPAN4-206ENST00000397408 PRLP01236 227 aa21.28■■□□□ 1
TSPAN4-206ENST00000397408 ALPIP09923 528 aa21.28■■□□□ 1
TSPAN4-206ENST00000397408 MSNP26038 577 aaKnown RBP21.28■■□□□ 1
TSPAN4-206ENST00000397408 VIPR1P32241 457 aa21.28■■□□□ 1
TSPAN4-206ENST00000397408 CXCR5P32302 372 aa21.28■■□□□ 1
TSPAN4-206ENST00000397408 PTPRRQ15256 657 aa21.28■■□□□ 1
TSPAN4-206ENST00000397408 PCSK7Q16549 785 aa21.28■■□□□ 1
TSPAN4-206ENST00000397408 STPG1Q5TH74 334 aa21.28■■□□□ 1
TSPAN4-206ENST00000397408 NDUFAF2Q8N183 169 aa21.28■■□□□ 1
TSPAN4-206ENST00000397408 MINDY1Q8N5J2 469 aa21.28■■□□□ 1
TSPAN4-206ENST00000397408 MFSD2AQ8NA29 543 aa21.28■■□□□ 1
TSPAN4-206ENST00000397408 NETO1Q8TDF5 533 aa21.28■■□□□ 1
TSPAN4-206ENST00000397408 MCCC1Q96RQ3 725 aaPredicted RBP21.28■■□□□ 1
TSPAN4-206ENST00000397408 KLF6Q99612 283 aaPredicted RBP21.28■■□□□ 1
TSPAN4-206ENST00000397408 C1QTNF7Q9BXJ2 289 aa21.28■■□□□ 1
TSPAN4-206ENST00000397408 UBP1Q9NZI7 540 aa21.28■■□□□ 1
TSPAN4-206ENST00000397408 RSPH14Q9UHP6 348 aa21.28■■□□□ 1
TSPAN4-206ENST00000397408 SNX11Q9Y5W9 270 aa21.28■■□□□ 1
TSPAN4-206ENST00000397408 CDX4O14627 284 aaPredicted RBP21.27■■□□□ 1
TSPAN4-206ENST00000397408 LZTS3O60299 673 aaPredicted RBP21.27■■□□□ 1
TSPAN4-206ENST00000397408 ZNF189O75820 626 aaPredicted RBP21.27■■□□□ 1
TSPAN4-206ENST00000397408 CYP2A6P11509 494 aaPredicted RBP21.27■■□□□ 1
TSPAN4-206ENST00000397408 RPL26P61254 145 aaKnown RBP21.27■■□□□ 1
TSPAN4-206ENST00000397408 SLC14A2Q15849 920 aa21.27■■□□□ 1
TSPAN4-206ENST00000397408 IL27RAQ6UWB1 636 aa21.27■■□□□ 1
TSPAN4-206ENST00000397408 LIPIQ6XZB0 460 aa21.27■■□□□ 1
TSPAN4-206ENST00000397408 DENND6BQ8NEG7 585 aa21.27■■□□□ 1
TSPAN4-206ENST00000397408 SLC35B2Q8TB61 432 aa21.27■■□□□ 1
TSPAN4-206ENST00000397408 TADA1Q96BN2 335 aa21.27■■□□□ 1
TSPAN4-206ENST00000397408 SCRN2Q96FV2 425 aa21.27■■□□□ 1
TSPAN4-206ENST00000397408 LENG8Q96PV6 779 aaPredicted RBP21.27■■□□□ 1
TSPAN4-206ENST00000397408 SMIM14Q96QK8 99 aa21.27■■□□□ 1
TSPAN4-206ENST00000397408 USP29Q9HBJ7 922 aa21.27■■□□□ 1
TSPAN4-206ENST00000397408 CDV3Q9UKY7 258 aaKnown RBP21.27■■□□□ 1
TSPAN4-206ENST00000397408 DNPEPQ9ULA0 475 aa21.27■■□□□ 1
TSPAN4-206ENST00000397408 RPL26L1Q9UNX3 145 aaKnown RBP21.27■■□□□ 1
TSPAN4-206ENST00000397408 PPIL1Q9Y3C6 166 aa21.27■■□□□ 1
TSPAN4-206ENST00000397408 TP53BP1Q12888 1972 aaPredicted RBP21.26■□□□□ 0.99
TSPAN4-206ENST00000397408 A0A0J9YYE9 177 aa21.26■□□□□ 0.99
TSPAN4-206ENST00000397408 CFAP69A5D8W1 941 aa21.26■□□□□ 0.99
TSPAN4-206ENST00000397408 C4orf47A7E2U8 309 aa21.26■□□□□ 0.99
TSPAN4-206ENST00000397408 TLR4O00206 839 aa21.26■□□□□ 0.99
TSPAN4-206ENST00000397408 CEP104O60308 925 aa21.26■□□□□ 0.99
TSPAN4-206ENST00000397408 PMPCBO75439 489 aa21.26■□□□□ 0.99
TSPAN4-206ENST00000397408 TRBC1P01850 177 aa21.26■□□□□ 0.99
TSPAN4-206ENST00000397408 LHCGRP22888 699 aa21.26■□□□□ 0.99
TSPAN4-206ENST00000397408 CTSKP43235 329 aa21.26■□□□□ 0.99
TSPAN4-206ENST00000397408 LIMK1P53667 647 aa21.26■□□□□ 0.99
TSPAN4-206ENST00000397408 CNGA3Q16281 694 aa21.26■□□□□ 0.99
TSPAN4-206ENST00000397408 ITPRIPL1Q6GPH6 555 aa21.26■□□□□ 0.99
TSPAN4-206ENST00000397408 KDELC2Q7Z4H8 507 aa21.26■□□□□ 0.99
TSPAN4-206ENST00000397408 PTAR1Q7Z6K3 402 aaPredicted RBP21.26■□□□□ 0.99
TSPAN4-206ENST00000397408 IQCHQ86VS3 1027 aa21.26■□□□□ 0.99
TSPAN4-206ENST00000397408 FCRL5Q96RD9 977 aa21.26■□□□□ 0.99
TSPAN4-206ENST00000397408 GBA3Q9H227 469 aa21.26■□□□□ 0.99
TSPAN4-206ENST00000397408 FAM153AQ9UHL3 310 aa21.26■□□□□ 0.99
TSPAN4-206ENST00000397408 POM121BA6NF01 834 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 CAPN8A6NHC0 703 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 A6NNZ2 444 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 FPGTO14772 594 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 HEXIM1O94992 359 aaKnown RBP21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 CER1O95813 267 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 FGGP02679 453 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 ATP1A1P05023 1023 aaKnown RBP21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 HNF1BP35680 557 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 IGFALSP35858 605 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 NXPH1P58417 271 aa21.25■□□□□ 0.99
TSPAN4-206ENST00000397408 OVGP1Q12889 678 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms