RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 MED28Q9H204 178 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 LINC00032P0C843 101 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 IFI30P13284 250 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 WASP42768 502 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 SGCBQ16585 318 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 RUNDC3AQ59EK9 446 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 PLEKHH3Q7Z736 793 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 COMTD1Q86VU5 262 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 DEPDC4Q8N2C3 294 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 OR52K2Q8NGK3 314 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 TKTL2Q9H0I9 626 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 VCPKMTQ9H867 229 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 RXFP1Q9HBX9 757 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 EGFL7Q9UHF1 273 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 NAALADL1Q9UQQ1 740 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 CORO7P57737 925 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 CCZ1BP86790 482 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 CCZ1P86791 482 aaPredicted RBP12.38□□□□□ -0.43
SMU1-201ENST00000397149 SMARCD3Q6STE5 483 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 ZNF280BQ86YH2 543 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 NAT9Q9BTE0 207 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 CISHQ9NSE2 258 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 MAPRE3Q9UPY8 281 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 HEG1Q9ULI3 1381 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 OR2AT4A6NND4 320 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 CYP1A1P04798 512 aaPredicted RBP12.38□□□□□ -0.43
SMU1-201ENST00000397149 NR2F6P10588 404 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 FOXM1Q08050 763 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 KCT2Q8NC54 265 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 PHF12Q96QT6 1004 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 STRA6Q9BX79 667 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 TRPV5Q9NQA5 729 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 MRPL17Q9NRX2 175 aaKnown RBP12.38□□□□□ -0.43
SMU1-201ENST00000397149 MALT1Q9UDY8 824 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 SLC27A6Q9Y2P4 619 aa12.38□□□□□ -0.43
SMU1-201ENST00000397149 UGT2B17O75795 530 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 ZFP69Q49AA0 526 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 AFTPHQ6ULP2 937 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 ZNF627Q7L945 461 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 AMIGO2Q86SJ2 522 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 OVCA2Q8WZ82 227 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 ZNF607Q96SK3 696 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 CPNE1Q99829 537 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 IRF2BPLQ9H1B7 796 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 BRD9Q9H8M2 597 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 SP140LQ9H930 580 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 SLC35G4P0C7Q5 338 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 CYP11B1P15538 503 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 ITGA2P17301 1181 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 AZGP1P25311 298 aaKnown RBP12.37□□□□□ -0.43
SMU1-201ENST00000397149 ADAM8P78325 824 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 PRKCDQ05655 676 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 PRKG2Q13237 762 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 TMC3Q7Z5M5 1100 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 AGPAT3Q9NRZ7 376 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 RDH8Q9NYR8 311 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 TBL1XO60907 577 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 ALOX5P09917 674 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 CD40LGP29965 261 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 SPANXN3Q5MJ09 141 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 DENND1CQ8IV53 801 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 SLC47A1Q96FL8 570 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 TRIM36Q9NQ86 728 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 INSRP06213 1382 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 A0A0G2JPF8 293 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 FAM86C2PA6NEL3 165 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 HNRNPCL3B7ZW38 293 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 HNRNPCL4P0DMR1 293 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 GP5P40197 560 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 CERCAMQ5T4B2 595 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 SSX6Q7RTT6 188 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 ZMIZ2Q8NF64 920 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 OR2L2Q8NH16 312 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 NEDD1Q8NHV4 660 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 RIPOR3Q96MK2 946 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 THAP1Q9NVV9 213 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 WHRNQ9P202 907 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 EME2A4GXA9 379 aaPredicted RBP12.37□□□□□ -0.43
SMU1-201ENST00000397149 SERPINB7O75635 380 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 SUPT20HL2P0C7V6 817 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 ITIH1P19827 911 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 PUM1Q14671 1186 aaKnown RBP eCLIP12.37□□□□□ -0.43
SMU1-201ENST00000397149 FBXO47Q5MNV8 452 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 HFE2Q6ZVN8 426 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 CHST15Q7LFX5 561 aaPredicted RBP12.37□□□□□ -0.43
SMU1-201ENST00000397149 THAP5Q7Z6K1 395 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 PCSK9Q8NBP7 692 aaKnown RBP12.37□□□□□ -0.43
SMU1-201ENST00000397149 ST3GAL5Q9UNP4 418 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 DUSP10Q9Y6W6 482 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 PRAMEF33A0A0G2JMD5 474 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 MAGEB16A2A368 324 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 TPP1O14773 563 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 PRAMEF10O60809 474 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 LINGO2Q7L985 606 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 TEX19Q8NA77 164 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 OSGEPQ9NPF4 335 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 FAM105AQ9NUU6 356 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 DMTF1Q9Y222 760 aa12.37□□□□□ -0.43
SMU1-201ENST00000397149 GAKO14976 1311 aa12.36□□□□□ -0.43
SMU1-201ENST00000397149 PRLP01236 227 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms