RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 NEU3Q9UQ49 428 aa15.06■□□□□ 0
SEC13-206ENST00000397102 IGHV5-10-1A0A0J9YXX1 117 aa15.05■□□□□ -0
SEC13-206ENST00000397102 GTPBP10A4D1E9 387 aaKnown RBP15.05■□□□□ -0
SEC13-206ENST00000397102 BLACEA4D250 179 aa15.05■□□□□ -0
SEC13-206ENST00000397102 GOLGA6L4A6NEF3 574 aa15.05■□□□□ -0
SEC13-206ENST00000397102 GOLGA8SH3BPF8 625 aa15.05■□□□□ -0
SEC13-206ENST00000397102 FOXN3O00409 490 aaPredicted RBP15.05■□□□□ -0
SEC13-206ENST00000397102 CAPN5O15484 640 aaPredicted RBP15.05■□□□□ -0
SEC13-206ENST00000397102 ZW10O43264 779 aa15.05■□□□□ -0
SEC13-206ENST00000397102 PIGNO95427 931 aa15.05■□□□□ -0
SEC13-206ENST00000397102 FGFR1OPO95684 399 aaKnown RBP15.05■□□□□ -0
SEC13-206ENST00000397102 KELP23276 732 aa15.05■□□□□ -0
SEC13-206ENST00000397102 PON1P27169 355 aa15.05■□□□□ -0
SEC13-206ENST00000397102 ADRA1BP35368 520 aa15.05■□□□□ -0
SEC13-206ENST00000397102 MMP12P39900 470 aa15.05■□□□□ -0
SEC13-206ENST00000397102 LIG3P49916 1009 aa15.05■□□□□ -0
SEC13-206ENST00000397102 OR1D5P58170 312 aa15.05■□□□□ -0
SEC13-206ENST00000397102 TRA2AQ13595 282 aaKnown RBP eCLIP15.05■□□□□ -0
SEC13-206ENST00000397102 NR1D2Q14995 579 aa15.05■□□□□ -0
SEC13-206ENST00000397102 AMZ1Q400G9 498 aa15.05■□□□□ -0
SEC13-206ENST00000397102 ERAP2Q6P179 960 aa15.05■□□□□ -0
SEC13-206ENST00000397102 C17orf82Q86X59 251 aaPredicted RBP15.05■□□□□ -0
SEC13-206ENST00000397102 ZNF354CQ86Y25 554 aa15.05■□□□□ -0
SEC13-206ENST00000397102 ELOA2Q8IYF1 753 aaPredicted RBP15.05■□□□□ -0
SEC13-206ENST00000397102 CACNA2D3Q8IZS8 1091 aa15.05■□□□□ -0
SEC13-206ENST00000397102 PLA2G15Q8NCC3 412 aa15.05■□□□□ -0
SEC13-206ENST00000397102 CCDC112Q8NEF3 446 aa15.05■□□□□ -0
SEC13-206ENST00000397102 CCL4L1Q8NHW4 92 aa15.05■□□□□ -0
SEC13-206ENST00000397102 FUBP1Q96AE4 644 aaKnown RBP15.05■□□□□ -0
SEC13-206ENST00000397102 TBC1D31Q96DN5 1066 aa15.05■□□□□ -0
SEC13-206ENST00000397102 CCDC74BQ96LY2 380 aa15.05■□□□□ -0
SEC13-206ENST00000397102 NCAPGQ9BPX3 1015 aa15.05■□□□□ -0
SEC13-206ENST00000397102 NUDT22Q9BRQ3 303 aa15.05■□□□□ -0
SEC13-206ENST00000397102 DDA1Q9BW61 102 aa15.05■□□□□ -0
SEC13-206ENST00000397102 ZNF71Q9NQZ8 489 aaPredicted RBP15.05■□□□□ -0
SEC13-206ENST00000397102 DAAM1Q9Y4D1 1078 aa15.05■□□□□ -0
SEC13-206ENST00000397102 RHPN2P1A8MT19 583 aa15.04■□□□□ -0
SEC13-206ENST00000397102 FAM72CH0Y354 149 aa15.04■□□□□ -0
SEC13-206ENST00000397102 INSIG1O15503 277 aa15.04■□□□□ -0
SEC13-206ENST00000397102 RAD1O60671 282 aa15.04■□□□□ -0
SEC13-206ENST00000397102 LRIG2O94898 1065 aa15.04■□□□□ -0
SEC13-206ENST00000397102 HOXC4P09017 264 aaPredicted RBP15.04■□□□□ -0
SEC13-206ENST00000397102 PNMA6AP0CW24 399 aaPredicted RBP15.04■□□□□ -0
SEC13-206ENST00000397102 ALDH4A1P30038 563 aa15.04■□□□□ -0
SEC13-206ENST00000397102 LIMK2P53671 638 aa15.04■□□□□ -0
SEC13-206ENST00000397102 MAZP56270 477 aaKnown RBP15.04■□□□□ -0
SEC13-206ENST00000397102 BPIFB4P59827 614 aa15.04■□□□□ -0
SEC13-206ENST00000397102 ATP11AP98196 1134 aa15.04■□□□□ -0
SEC13-206ENST00000397102 GRM3Q14832 879 aa15.04■□□□□ -0
SEC13-206ENST00000397102 TSR1Q2NL82 804 aaKnown RBP15.04■□□□□ -0
SEC13-206ENST00000397102 FAM72AQ5TYM5 149 aa15.04■□□□□ -0
SEC13-206ENST00000397102 FAM72DQ6L9T8 149 aa15.04■□□□□ -0
SEC13-206ENST00000397102 FAM72BQ86X60 149 aa15.04■□□□□ -0
SEC13-206ENST00000397102 FAM71AQ8IYT1 594 aa15.04■□□□□ -0
SEC13-206ENST00000397102 MSANTD4Q8NCY6 345 aa15.04■□□□□ -0
SEC13-206ENST00000397102 SLC45A3Q96JT2 553 aa15.04■□□□□ -0
SEC13-206ENST00000397102 SUV39H2Q9H5I1 410 aa15.04■□□□□ -0
SEC13-206ENST00000397102 LRRC4CQ9HCJ2 640 aa15.04■□□□□ -0
SEC13-206ENST00000397102 CYP4F12Q9HCS2 524 aa15.04■□□□□ -0
SEC13-206ENST00000397102 SIX2Q9NPC8 291 aa15.04■□□□□ -0
SEC13-206ENST00000397102 DNAJC12Q9UKB3 198 aa15.04■□□□□ -0
SEC13-206ENST00000397102 B3GALT1Q9Y5Z6 326 aa15.04■□□□□ -0
SEC13-206ENST00000397102 SPTAN1Q13813 2472 aaKnown RBP15.04■□□□□ -0
SEC13-206ENST00000397102 CFAP69A5D8W1 941 aa15.03■□□□□ -0
SEC13-206ENST00000397102 STAT1P42224 750 aa15.03■□□□□ -0
SEC13-206ENST00000397102 RAB6CQ53S08 254 aa15.03■□□□□ -0
SEC13-206ENST00000397102 C2CD6Q53TS8 623 aa15.03■□□□□ -0
SEC13-206ENST00000397102 BRAT1Q6PJG6 821 aa15.03■□□□□ -0
SEC13-206ENST00000397102 DNAAF5Q86Y56 855 aa15.03■□□□□ -0
SEC13-206ENST00000397102 NETO2Q8NC67 525 aa15.03■□□□□ -0
SEC13-206ENST00000397102 AGBL5Q8NDL9 886 aa15.03■□□□□ -0
SEC13-206ENST00000397102 ART4Q93070 314 aa15.03■□□□□ -0
SEC13-206ENST00000397102 MIB2Q96AX9 1013 aa15.03■□□□□ -0
SEC13-206ENST00000397102 EXOC2Q96KP1 924 aa15.03■□□□□ -0
SEC13-206ENST00000397102 ASPSCR1Q9BZE9 553 aa15.03■□□□□ -0
SEC13-206ENST00000397102 RAB6CQ9H0N0 254 aa15.03■□□□□ -0
SEC13-206ENST00000397102 LHX3Q9UBR4 397 aa15.03■□□□□ -0
SEC13-206ENST00000397102 PLAAQ9Y263 795 aa15.03■□□□□ -0
SEC13-206ENST00000397102 ATP8A1Q9Y2Q0 1164 aa15.03■□□□□ -0
SEC13-206ENST00000397102 PRSS38A1L453 326 aa15.02■□□□□ -0
SEC13-206ENST00000397102 LSM8O95777 96 aaKnown RBP15.02■□□□□ -0
SEC13-206ENST00000397102 PLEKP08567 350 aaPredicted RBP15.02■□□□□ -0
SEC13-206ENST00000397102 CCNB1P14635 433 aa15.02■□□□□ -0
SEC13-206ENST00000397102 CD1CP29017 333 aa15.02■□□□□ -0
SEC13-206ENST00000397102 CSTF2P33240 577 aaKnown RBP eCLIP15.02■□□□□ -0
SEC13-206ENST00000397102 TRIM23P36406 574 aa15.02■□□□□ -0
SEC13-206ENST00000397102 GPR3P46089 330 aa15.02■□□□□ -0
SEC13-206ENST00000397102 CD97P48960 835 aa15.02■□□□□ -0
SEC13-206ENST00000397102 CDC20Q12834 499 aa15.02■□□□□ -0
SEC13-206ENST00000397102 CDO1Q16878 200 aa15.02■□□□□ -0
SEC13-206ENST00000397102 CFAP58Q5T655 872 aa15.02■□□□□ -0
SEC13-206ENST00000397102 EMC1Q8N766 993 aa15.02■□□□□ -0
SEC13-206ENST00000397102 OR4D9Q8NGE8 314 aa15.02■□□□□ -0
SEC13-206ENST00000397102 ZDHHC1Q8WTX9 485 aa15.02■□□□□ -0
SEC13-206ENST00000397102 ABHD17AQ96GS6 310 aa15.02■□□□□ -0
SEC13-206ENST00000397102 ZNF641Q96N77 438 aaPredicted RBP15.02■□□□□ -0
SEC13-206ENST00000397102 KLC2Q9H0B6 622 aa15.02■□□□□ -0
SEC13-206ENST00000397102 NOL6Q9H6R4 1146 aaKnown RBP15.02■□□□□ -0
SEC13-206ENST00000397102 METTL5Q9NRN9 209 aaKnown RBP15.02■□□□□ -0
SEC13-206ENST00000397102 SPATS2LQ9NUQ6 558 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms