RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 KELP23276 732 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 KDELR1P24390 212 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 GJC1P36383 396 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 RGRP47804 291 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 MMRN1Q13201 1228 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 MTM1Q13496 603 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 PROX2Q3B8N5 592 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 NCBP2-AS2Q69YL0 99 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 ALG1LQ6GMV1 187 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 DHRS13Q6UX07 377 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 MARCH9Q86YJ5 346 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 RHOT1Q8IXI2 618 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 RAVER1Q8IY67 606 aaKnown RBP14.02□□□□□ -0.17
SEC13-204ENST00000397099 SLC25A45Q8N413 288 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 TC2NQ8N9U0 490 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 NETO2Q8NC67 525 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.02□□□□□ -0.17
SEC13-204ENST00000397099 GLMNQ92990 594 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 HDAC11Q96DB2 347 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 RNF157Q96PX1 679 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 PANX2Q96RD6 677 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 SLC13A1Q9BZW2 595 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 SPASTQ9UBP0 616 aa14.02□□□□□ -0.17
SEC13-204ENST00000397099 KNTC1P50748 2209 aa14.01□□□□□ -0.17
SEC13-204ENST00000397099 GOLGA4Q13439 2230 aaKnown RBP14.01□□□□□ -0.17
SEC13-204ENST00000397099 A0A0A6YYK5 440 aaPredicted RBP14.01□□□□□ -0.17
SEC13-204ENST00000397099 FAM149AA5PLN7 773 aa14.01□□□□□ -0.17
SEC13-204ENST00000397099 PSMD11O00231 422 aa14.01□□□□□ -0.17
SEC13-204ENST00000397099 PDE2AO00408 941 aaPredicted RBP14.01□□□□□ -0.17
SEC13-204ENST00000397099 MUSKO15146 869 aa14.01□□□□□ -0.17
SEC13-204ENST00000397099 AQP9O43315 295 aa14.01□□□□□ -0.17
SEC13-204ENST00000397099 MFSD11O43934 449 aa14.01□□□□□ -0.17
SEC13-204ENST00000397099 CPP00450 1065 aa14.01□□□□□ -0.17
SEC13-204ENST00000397099 GP1BAP07359 652 aa14.01□□□□□ -0.17
SEC13-204ENST00000397099 JUNDP17535 347 aa14.01□□□□□ -0.17
SEC13-204ENST00000397099 IGFALSP35858 605 aa14.01□□□□□ -0.17
SEC13-204ENST00000397099 MAGEA1P43355 309 aa14.01□□□□□ -0.17
SEC13-204ENST00000397099 ACADVLP49748 655 aa14.01□□□□□ -0.17
SEC13-204ENST00000397099 TAS2R40P59535 323 aa14.01□□□□□ -0.17
SEC13-204ENST00000397099 RPL26P61254 145 aaKnown RBP14.01□□□□□ -0.17
SEC13-204ENST00000397099 LRRC73Q5JTD7 316 aa14.01□□□□□ -0.17
SEC13-204ENST00000397099 ARMC12Q5T9G4 340 aa14.01□□□□□ -0.17
SEC13-204ENST00000397099 ZCCHC8Q6NZY4 707 aaKnown RBP14.01□□□□□ -0.17
SEC13-204ENST00000397099 USP45Q70EL2 814 aa14.01□□□□□ -0.17
SEC13-204ENST00000397099 TMTC1Q8IUR5 882 aa14.01□□□□□ -0.17
SEC13-204ENST00000397099 FSTL5Q8N475 847 aaPredicted RBP14.01□□□□□ -0.17
SEC13-204ENST00000397099 MDM1Q8TC05 714 aa14.01□□□□□ -0.17
SEC13-204ENST00000397099 NOD2Q9HC29 1040 aa14.01□□□□□ -0.17
SEC13-204ENST00000397099 SALL4Q9UJQ4 1053 aa14.01□□□□□ -0.17
SEC13-204ENST00000397099 RPL26L1Q9UNX3 145 aaKnown RBP14.01□□□□□ -0.17
SEC13-204ENST00000397099 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.01□□□□□ -0.17
SEC13-204ENST00000397099 PPIL1Q9Y3C6 166 aa14.01□□□□□ -0.17
SEC13-204ENST00000397099 LRRD1A4D1F6 860 aa14□□□□□ -0.17
SEC13-204ENST00000397099 PPP1R12AO14974 1030 aaPredicted RBP14□□□□□ -0.17
SEC13-204ENST00000397099 PSTPIP1O43586 416 aa14□□□□□ -0.17
SEC13-204ENST00000397099 SIGLEC6O43699 453 aa14□□□□□ -0.17
SEC13-204ENST00000397099 SPOPO43791 374 aa14□□□□□ -0.17
SEC13-204ENST00000397099 SDC3O75056 442 aa14□□□□□ -0.17
SEC13-204ENST00000397099 CKMT1AP12532 417 aa14□□□□□ -0.17
SEC13-204ENST00000397099 CCNB1P14635 433 aa14□□□□□ -0.17
SEC13-204ENST00000397099 VIPR1P32241 457 aa14□□□□□ -0.17
SEC13-204ENST00000397099 NR2C2P49116 596 aa14□□□□□ -0.17
SEC13-204ENST00000397099 RPIAP49247 311 aa14□□□□□ -0.17
SEC13-204ENST00000397099 DAB2P98082 770 aa14□□□□□ -0.17
SEC13-204ENST00000397099 PPARDQ03181 441 aa14□□□□□ -0.17
SEC13-204ENST00000397099 DNAJC3Q13217 504 aa14□□□□□ -0.17
SEC13-204ENST00000397099 NFATC4Q14934 902 aa14□□□□□ -0.17
SEC13-204ENST00000397099 PDK1Q15118 436 aa14□□□□□ -0.17
SEC13-204ENST00000397099 IRF4Q15306 451 aa14□□□□□ -0.17
SEC13-204ENST00000397099 ELOCQ15369 112 aa14□□□□□ -0.17
SEC13-204ENST00000397099 WSCD2Q2TBF2 565 aa14□□□□□ -0.17
SEC13-204ENST00000397099 ATP13A4Q4VNC1 1196 aa14□□□□□ -0.17
SEC13-204ENST00000397099 LVRNQ6Q4G3 990 aa14□□□□□ -0.17
SEC13-204ENST00000397099 LIPIQ6XZB0 460 aa14□□□□□ -0.17
SEC13-204ENST00000397099 PROSER1Q86XN7 944 aa14□□□□□ -0.17
SEC13-204ENST00000397099 TP53INP2Q8IXH6 220 aa14□□□□□ -0.17
SEC13-204ENST00000397099 TXLNBQ8N3L3 684 aa14□□□□□ -0.17
SEC13-204ENST00000397099 ZNF548Q8NEK5 533 aaPredicted RBP14□□□□□ -0.17
SEC13-204ENST00000397099 TPCN2Q8NHX9 752 aa14□□□□□ -0.17
SEC13-204ENST00000397099 PDCD6IPQ8WUM4 868 aaKnown RBP14□□□□□ -0.17
SEC13-204ENST00000397099 SCG3Q8WXD2 468 aaKnown RBP14□□□□□ -0.17
SEC13-204ENST00000397099 SCRN2Q96FV2 425 aa14□□□□□ -0.17
SEC13-204ENST00000397099 IL12RB2Q99665 862 aa14□□□□□ -0.17
SEC13-204ENST00000397099 NT5MQ9NPB1 228 aa14□□□□□ -0.17
SEC13-204ENST00000397099 APOBEC3BQ9UH17 382 aaKnown RBP14□□□□□ -0.17
SEC13-204ENST00000397099 LMO7DNF2Z398 122 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 TAF4O00268 1085 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 CACNB4O00305 520 aaPredicted RBP13.99□□□□□ -0.17
SEC13-204ENST00000397099 APOL1O14791 398 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 RECQL5O94762 991 aaPredicted RBP13.99□□□□□ -0.17
SEC13-204ENST00000397099 RASGRP1O95267 797 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 PGLSO95336 258 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 PYGLP06737 847 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 ALPIP09923 528 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 ZNF30P17039 623 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 NOP2P46087 812 aaKnown RBP13.99□□□□□ -0.17
SEC13-204ENST00000397099 ZNF75DP51815 510 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 KIAA1024LP59773 190 aa13.99□□□□□ -0.17
SEC13-204ENST00000397099 PPIDQ08752 370 aaKnown RBP13.99□□□□□ -0.17
SEC13-204ENST00000397099 ITKQ08881 620 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms