RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 CAPSQ13938 189 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 METTL3Q86U44 580 aaKnown RBP17.49■□□□□ 0.39
MCF2L-208ENST00000397030 MAP4K3Q8IVH8 894 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 PCDH20Q8N6Y1 951 aaKnown RBP17.49■□□□□ 0.39
MCF2L-208ENST00000397030 DDHD1Q8NEL9 900 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 COPS7AQ9UBW8 275 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 LPOP22079 712 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-208ENST00000397030 ANKRD23Q86SG2 305 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 SNX32Q86XE0 403 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 LNX2Q8N448 690 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 SVOPQ8N4V2 548 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 OR52K2Q8NGK3 314 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 ENKURQ8TC29 256 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 IL22Q9GZX6 179 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 CMTM6Q9NX76 183 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 ENOPH1Q9UHY7 261 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 FBXW2Q9UKT8 454 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 DMTF1Q9Y222 760 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 GLTPD2A6NH11 291 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 SLC28A1O00337 649 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 LYNP07948 512 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 ATP5F1P24539 256 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-208ENST00000397030 SCNN1AP37088 669 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 PKNOX1P55347 436 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 MYBPC2Q14324 1141 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 RNASE12Q5GAN4 147 aaKnown RBP17.49■□□□□ 0.39
MCF2L-208ENST00000397030 PPCDCQ96CD2 204 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 NECTIN3Q9NQS3 549 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 FAM92AA1XBS5 289 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 OR2AG2A6NM03 316 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 PAGE1O75459 146 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 C1RP00736 705 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 CALB2P22676 271 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 KRR1Q13601 381 aaKnown RBP17.49■□□□□ 0.39
MCF2L-208ENST00000397030 PPP1R15BQ5SWA1 713 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 INTS11Q5TA45 600 aaKnown RBP17.49■□□□□ 0.39
MCF2L-208ENST00000397030 TMEM164Q5U3C3 297 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 MSANTD2Q6P1R3 559 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 PRSS55Q6UWB4 352 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-208ENST00000397030 UNC93AQ86WB7 457 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 CIR1Q86X95 450 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-208ENST00000397030 KIAA0895Q8NCT3 520 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 FAM81AQ8TBF8 368 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 HBS1LQ9Y450 684 aaKnown RBP17.49■□□□□ 0.39
MCF2L-208ENST00000397030 CASZ1Q86V15 1759 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 PIGNO95427 931 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 PECAM1P16284 738 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-208ENST00000397030 ILF3Q12906 894 aaKnown RBP eCLIP17.49■□□□□ 0.391e-6■■■■□ 19.7
MCF2L-208ENST00000397030 AADACL2Q6P093 401 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 FAM35AQ86V20 835 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 VAT1Q99536 393 aa17.49■□□□□ 0.39
MCF2L-208ENST00000397030 ZFP37Q9Y6Q3 630 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-208ENST00000397030 ENPP3O14638 875 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 ERCC2P18074 760 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 WARSP23381 471 aaKnown RBP17.48■□□□□ 0.39
MCF2L-208ENST00000397030 NR1D2Q14995 579 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 PPTC7Q8NI37 304 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 DGCR6LQ9BY27 220 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 PNO1Q9NRX1 252 aaKnown RBP17.48■□□□□ 0.39
MCF2L-208ENST00000397030 PCDHGA3Q9Y5H0 932 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 SALL1Q9NSC2 1324 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 YDJCA8MPS7 323 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 DNALI1O14645 258 aaPredicted RBP17.48■□□□□ 0.39
MCF2L-208ENST00000397030 KCT2Q8NC54 265 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 TEX47Q8TBZ9 253 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 SHC3Q92529 594 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 SNRNP25Q9BV90 132 aaKnown RBP17.48■□□□□ 0.39
MCF2L-208ENST00000397030 NCDNQ9UBB6 729 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 PADI3Q9ULW8 664 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 XKRYO14609 159 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 UGT1A5P35504 534 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 DGCR6Q14129 220 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 SLC30A9Q6PML9 568 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 PARP8Q8N3A8 854 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 ARL14EPQ8N8R7 260 aaPredicted RBP17.48■□□□□ 0.39
MCF2L-208ENST00000397030 MAGEE2Q8TD90 523 aaPredicted RBP17.48■□□□□ 0.39
MCF2L-208ENST00000397030 DNAJC28Q9NX36 388 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 RHBDL2Q9NX52 303 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 FRMPD4Q14CM0 1322 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 ATG13O75143 517 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 DBIP07108 87 aaKnown RBP17.48■□□□□ 0.39
MCF2L-208ENST00000397030 PDHA2P29803 388 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 CASRP41180 1078 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 GALNTL5Q7Z4T8 443 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 CLHC1Q8NHS4 586 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 COPS8Q99627 209 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 LDAHQ9H6V9 325 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 A8MUA0 341 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 BANF1O75531 89 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 ATXN1P54253 815 aaKnown RBP17.48■□□□□ 0.39
MCF2L-208ENST00000397030 UGT2B15P54855 530 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 CAP1Q01518 475 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 MBTD1Q05BQ5 628 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 PACS2Q86VP3 889 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 BEND7Q8N7W2 519 aaPredicted RBP17.48■□□□□ 0.39
MCF2L-208ENST00000397030 OR4L1Q8NH43 312 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 ACP6Q9NPH0 428 aa17.48■□□□□ 0.39
MCF2L-208ENST00000397030 ULK1O75385 1050 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 MC1RQ01726 317 aa17.47■□□□□ 0.39
MCF2L-208ENST00000397030 NEK5Q6P3R8 708 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms