RNA–Protein interactions for RNA: ENST00000396668.7

TMEM106B-202, Transcript of transmembrane protein 106B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106B, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106B-202ENST00000396668 SLC18A2Q05940 514 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 SULT2A1Q06520 285 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 LRRC14Q15048 493 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 MYLK3Q32MK0 819 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 ACCSLQ4AC99 568 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 ZNF789Q5FWF6 425 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 SWT1Q5T5J6 900 aaKnown RBP12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 ZNF557Q8N988 423 aaPredicted RBP12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 HDAC10Q969S8 669 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 ATXN7L3BQ96GX2 97 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 TBATAQ96M53 351 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 RBBP8Q99708 897 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 CPNE1Q99829 537 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 KCNK9Q9NPC2 374 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 SLC25A13Q9UJS0 675 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 GRID1Q9ULK0 1009 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 DENND4AQ7Z401 1863 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 PRPF4O43172 522 aaKnown RBP eCLIP12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 KRT37O76014 449 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 IGSF6O95976 241 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 ALPIP09923 528 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 PSMC3P17980 439 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 POLR2EP19388 210 aaKnown RBP12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 IGFBP4P22692 258 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 GP5P40197 560 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 OPRD1P41143 372 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 SLC1A2P43004 574 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 ZNF140P52738 457 aaPredicted RBP12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 WDR4P57081 412 aaKnown RBP12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 MPP1Q00013 466 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 NAB1Q13506 487 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 RUNX3Q13761 415 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 FSTL4Q6MZW2 842 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 METTL3Q86U44 580 aaKnown RBP12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 SPNS2Q8IVW8 549 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 ZNF366Q8N895 744 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 ELSPBP1Q96BH3 223 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 SMC6Q96SB8 1091 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 MYCBPQ99417 103 aaPredicted RBP12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 ADGRE3Q9BY15 652 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 CIPCQ9C0C6 399 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 CEP44Q9C0F1 390 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 CNOT10Q9H9A5 744 aaKnown RBP12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 SENP1Q9P0U3 644 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 MARCH4Q9P2E8 410 aaPredicted RBP12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 HCN2Q9UL51 889 aa12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 MTO1Q9Y2Z2 717 aaKnown RBP12.76□□□□□ -0.37
TMEM106B-202ENST00000396668 KRT38O76015 456 aa12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 MT-ND3P03897 115 aa12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 DLDP09622 509 aaKnown RBP12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 PRSS56P0CW18 603 aa12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 CHRM1P11229 460 aaPredicted RBP12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 CTPS1P17812 591 aa12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 GJA4P35212 333 aa12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 SNRPD1P62314 119 aaKnown RBP12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 GNGT1P63211 74 aa12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 BCL2L1Q07817 233 aa12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 PDGFRLQ15198 375 aa12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 CDKN3Q16667 212 aa12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 CARD16Q5EG05 197 aa12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 ARMC3Q5W041 872 aa12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 TIFABQ6ZNK6 161 aa12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 GLT6D1Q7Z4J2 308 aa12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 LDB1Q86U70 411 aaPredicted RBP12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 TTC30BQ8N4P2 665 aa12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 PCDH20Q8N6Y1 951 aaKnown RBP12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 ANKRD42Q8N9B4 389 aa12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 MGARPQ8TDB4 240 aa12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 SUSD6Q92537 303 aa12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 ECHDC3Q96DC8 303 aa12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 RIPOR3Q96MK2 946 aa12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 THG1LQ9NWX6 298 aaKnown RBP12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 TRIOBPQ9H2D6 2365 aa12.75□□□□□ -0.37
TMEM106B-202ENST00000396668 H3BQ06 376 aaPredicted RBP12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 HAUS5O94927 633 aa12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 GSRP00390 522 aa12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 PSMA3P25788 255 aa12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 LSP1P33241 339 aa12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 SERPINB9P50453 376 aa12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 LIMK2P53671 638 aa12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 KDSRQ06136 332 aa12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 SEMA3AQ14563 771 aa12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 ARMC12Q5T9G4 340 aa12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 GRTP1Q5TC63 336 aa12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 ZNF470Q6ECI4 717 aa12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 NEPROQ6NW34 567 aa12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 PTAR1Q7Z6K3 402 aaPredicted RBP12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 ZC3HC1Q86WB0 502 aaKnown RBP12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 MICALL1Q8N3F8 863 aa12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 RYBPQ8N488 228 aaPredicted RBP12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 C2CD4AQ8NCU7 369 aaPredicted RBP12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 OR4K2Q8NGD2 314 aa12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 PTPRN2Q92932 1015 aa12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 LRCH3Q96II8 777 aa12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 FBRSL1Q9HCM7 1045 aaKnown RBP12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 ELOVL2Q9NXB9 296 aa12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 SLC17A7Q9P2U7 560 aa12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 USP15Q9Y4E8 981 aaPredicted RBP12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.74□□□□□ -0.37
TMEM106B-202ENST00000396668 CCDC162PA2VCL2 907 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms