RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 C8GP07360 202 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 WNT3AP56704 352 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 NR1D2Q14995 579 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 MAPKAPK3Q16644 382 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 PPP1R26Q5T8A7 1209 aaPredicted RBP15.69■□□□□ 0.1
GNE-202ENST00000396594 PMF1Q6P1K2 205 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 FAM220AQ7Z4H9 259 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 PHYKPLQ8IUZ5 450 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 IL31RAQ8NI17 732 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 TMEM79Q9BSE2 394 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 SERHL2Q9H4I8 314 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 SERHLQ9NQF3 203 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 DLGAP2Q9P1A6 1054 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 SNX8Q9Y5X2 465 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 LRRC72A6NJI9 287 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 ZNF487B1APH4 448 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 AP2A1O95782 977 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 SRPRAP08240 638 aaKnown RBP15.69■□□□□ 0.1
GNE-202ENST00000396594 TACR2P21452 398 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 IL5RAQ01344 420 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 HNRNPDQ14103 355 aaKnown RBP15.69■□□□□ 0.1
GNE-202ENST00000396594 TEAD4Q15561 434 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 ARSHQ5FYA8 562 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 EIF3MQ7L2H7 374 aaKnown RBP15.69■□□□□ 0.1
GNE-202ENST00000396594 C16orf59Q7L2K0 433 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 OR5B17Q8NGF7 314 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 DMAC2Q9NW81 257 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 DNAJC28Q9NX36 388 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 IGLV3-22A0A075B6J6 115 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 TFEBP19484 476 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 RPP38P78345 283 aaKnown RBP15.69■□□□□ 0.1
GNE-202ENST00000396594 DPYSQ14117 519 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 C15orf59Q2T9L4 293 aaPredicted RBP15.69■□□□□ 0.1
GNE-202ENST00000396594 GPR180Q86V85 440 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 KIAA2013Q8IYS2 634 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 ZNF614Q8N883 585 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 CSPG4P5Q96PW8 444 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 MTRRQ9UBK8 725 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 SAMD4AQ9UPU9 718 aaKnown RBP15.69■□□□□ 0.1
GNE-202ENST00000396594 ZNF780BQ9Y6R6 833 aa15.69■□□□□ 0.1
GNE-202ENST00000396594 MATN3O15232 486 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 PTPRNQ16849 979 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 TREML2Q5T2D2 321 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 CCDC81Q6ZN84 652 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 KLRG2A4D1S0 409 aaPredicted RBP15.68■□□□□ 0.1
GNE-202ENST00000396594 PGK1P00558 417 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 UMPSP11172 480 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 IL17AQ16552 155 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 INAVAQ3KP66 663 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 EEF1DP3Q658K8 133 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 RNFT2Q96EX2 444 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 RTKNQ9BST9 563 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 CLN6Q9NWW5 311 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 KLQ9UEF7 1012 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 PAIP2BQ9ULR5 123 aaKnown RBP15.68■□□□□ 0.1
GNE-202ENST00000396594 GABRDO14764 452 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 ATP9AO75110 1047 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 ATXN8OSP0DMR3 200 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 IDSP22304 550 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 NDUFS1P28331 727 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 TTC7BQ86TV6 843 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 TMC8Q8IU68 726 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 KAT2BQ92831 832 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 UPF1Q92900 1129 aaKnown RBP eCLIP15.68■□□□□ 0.15e-13■■■■■ 43.7
GNE-202ENST00000396594 IGSF9Q9P2J2 1179 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 TFR2Q9UP52 801 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 ABHD14A-ACY1A0A1B0GW23 586 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 SNX3O60493 162 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 FLT3P36888 993 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 TMEM44Q2T9K0 475 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 LDLRAP1Q5SW96 308 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 FBXW10Q5XX13 1052 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 IZUMO2Q6UXV1 221 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 C17orf64Q86WR6 236 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 DCAKDQ8WVC6 231 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 CLEC4DQ8WXI8 215 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 C7orf26Q96N11 449 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 ADAM33Q9BZ11 813 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 STXBP5LQ9Y2K9 1186 aa15.68■□□□□ 0.1
GNE-202ENST00000396594 KPNA4O00629 521 aaPredicted RBP15.67■□□□□ 0.1
GNE-202ENST00000396594 INPP4BO15327 924 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 PKMP14618 531 aaKnown RBP15.67■□□□□ 0.1
GNE-202ENST00000396594 GABRR2P28476 465 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 FUT10Q6P4F1 479 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 NEK10Q6ZWH5 1172 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 FGD2Q7Z6J4 655 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 MAB21L3Q8N8X9 362 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 SCAIQ8N9R8 606 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 TTLQ8NG68 377 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 WDR36Q8NI36 951 aaKnown RBP15.67■□□□□ 0.1
GNE-202ENST00000396594 GDPD5Q8WTR4 605 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 FEM1CQ96JP0 617 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 ALG9Q9H6U8 611 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 DNAJC11Q9NVH1 559 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 SFMBT1Q9UHJ3 866 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 PADI3Q9ULW8 664 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 HNRNPCP07910 306 aaKnown RBP eCLIP15.67■□□□□ 0.1
GNE-202ENST00000396594 CXCR3P49682 368 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 SPIRE1Q08AE8 756 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 RAB30Q15771 203 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms