RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 FAM129CQ86XR2 697 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 OR56A4Q8NGH8 313 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 KAT5Q92993 513 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 PAGE5Q96GU1 130 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 MED15Q96RN5 788 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 CTRCQ99895 268 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 DPYSL5Q9BPU6 564 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 WRAP53Q9BUR4 548 aaKnown RBP13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 OSBPL1AQ9BXW6 950 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 APMAPQ9HDC9 416 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 FOXD4L1Q9NU39 408 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 ASNSD1Q9NWL6 643 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 MPP6Q9NZW5 540 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 MTMR6Q9Y217 621 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 SNX10Q9Y5X0 201 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 ST14Q9Y5Y6 855 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 RPS6KL1Q9Y6S9 549 aa13.76□□□□□ -0.21
VCPKMT-201ENST00000395859 ZNF469Q96JG9 3925 aaPredicted RBP13.75□□□□□ -0.21
VCPKMT-201ENST00000395859 SYNJ2BP-COX16A0A087WUM0 186 aa13.75□□□□□ -0.21
VCPKMT-201ENST00000395859 PPM1DO15297 605 aa13.75□□□□□ -0.21
VCPKMT-201ENST00000395859 CBX6O95503 412 aa13.75□□□□□ -0.21
VCPKMT-201ENST00000395859 GLI1P08151 1106 aa13.75□□□□□ -0.21
VCPKMT-201ENST00000395859 MYLK3Q32MK0 819 aa13.75□□□□□ -0.21
VCPKMT-201ENST00000395859 EFHC1Q5JVL4 640 aa13.75□□□□□ -0.21
VCPKMT-201ENST00000395859 CEACAM20Q6UY09 585 aa13.75□□□□□ -0.21
VCPKMT-201ENST00000395859 NRSN1Q8IZ57 195 aa13.75□□□□□ -0.21
VCPKMT-201ENST00000395859 TTC13Q8NBP0 860 aa13.75□□□□□ -0.21
VCPKMT-201ENST00000395859 PLA2G15Q8NCC3 412 aa13.75□□□□□ -0.21
VCPKMT-201ENST00000395859 OR2AP1Q8NGE2 309 aa13.75□□□□□ -0.21
VCPKMT-201ENST00000395859 KIAA1524Q8TCG1 905 aa13.75□□□□□ -0.21
VCPKMT-201ENST00000395859 ARHGEF2Q92974 986 aaKnown RBP13.75□□□□□ -0.21
VCPKMT-201ENST00000395859 SIK2Q9H0K1 926 aa13.75□□□□□ -0.21
VCPKMT-201ENST00000395859 COX16Q9P0S2 106 aa13.75□□□□□ -0.21
VCPKMT-201ENST00000395859 PCDHB4Q9Y5E5 795 aa13.75□□□□□ -0.21
VCPKMT-201ENST00000395859 PCDHGA9Q9Y5G4 932 aaKnown RBP13.75□□□□□ -0.21
VCPKMT-201ENST00000395859 OAS3Q9Y6K5 1087 aaKnown RBP13.75□□□□□ -0.21
VCPKMT-201ENST00000395859 SVILO95425 2214 aa13.75□□□□□ -0.21
VCPKMT-201ENST00000395859 RHPN2P1A8MT19 583 aa13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 MAP3K6O95382 1288 aa13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 ECEL1O95672 775 aa13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 POP4O95707 220 aaKnown RBP13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 HSP90AA1P07900 732 aaKnown RBP13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 CCNB1P14635 433 aa13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 OR1E1P30953 314 aa13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 TRIM23P36406 574 aa13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 CXCR3P49682 368 aa13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 LRMPQ12912 555 aa13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 ERV3-1Q14264 604 aa13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 RESP18Q5W5W9 173 aa13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 GDPD4Q6W3E5 623 aa13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 XYLT1Q86Y38 959 aa13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 NAGSQ8N159 534 aa13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 GUF1Q8N442 669 aaKnown RBP13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 ESX1Q8N693 406 aa13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 ZDHHC1Q8WTX9 485 aa13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 PATE1Q8WXA2 126 aa13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 C1orf74Q96LT6 269 aa13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 C5orf34Q96MH7 638 aa13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 ATP13A1Q9HD20 1204 aa13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 PIGVQ9NUD9 493 aa13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 SERTAD1Q9UHV2 236 aa13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 CNTN6Q9UQ52 1028 aa13.74□□□□□ -0.21
VCPKMT-201ENST00000395859 KRIT1O00522 736 aa13.73□□□□□ -0.21
VCPKMT-201ENST00000395859 ZW10O43264 779 aa13.73□□□□□ -0.21
VCPKMT-201ENST00000395859 RHOBTB3O94955 611 aa13.73□□□□□ -0.21
VCPKMT-201ENST00000395859 YEATS4O95619 227 aa13.73□□□□□ -0.21
VCPKMT-201ENST00000395859 FUCA1P04066 466 aa13.73□□□□□ -0.21
VCPKMT-201ENST00000395859 LEPRP48357 1165 aaKnown RBP13.73□□□□□ -0.21
VCPKMT-201ENST00000395859 GNA12Q03113 381 aa13.73□□□□□ -0.21
VCPKMT-201ENST00000395859 TESK1Q15569 626 aa13.73□□□□□ -0.21
VCPKMT-201ENST00000395859 KDELC2Q7Z4H8 507 aa13.73□□□□□ -0.21
VCPKMT-201ENST00000395859 SPON2Q9BUD6 331 aa13.73□□□□□ -0.21
VCPKMT-201ENST00000395859 LGR4Q9BXB1 951 aa13.73□□□□□ -0.21
VCPKMT-201ENST00000395859 SLC29A3Q9BZD2 475 aa13.73□□□□□ -0.21
VCPKMT-201ENST00000395859 TKTL2Q9H0I9 626 aa13.73□□□□□ -0.21
VCPKMT-201ENST00000395859 SIDT1Q9NXL6 827 aaKnown RBP13.73□□□□□ -0.21
VCPKMT-201ENST00000395859 CHMP5Q9NZZ3 219 aa13.73□□□□□ -0.21
VCPKMT-201ENST00000395859 TAAR2Q9P1P5 351 aa13.73□□□□□ -0.21
VCPKMT-201ENST00000395859 CROTQ9UKG9 612 aa13.73□□□□□ -0.21
VCPKMT-201ENST00000395859 PCDHB3Q9Y5E6 796 aa13.73□□□□□ -0.21
VCPKMT-201ENST00000395859 PCDHGA6Q9Y5G7 932 aa13.73□□□□□ -0.21
VCPKMT-201ENST00000395859 TSPAN11A1L157 253 aa13.72□□□□□ -0.21
VCPKMT-201ENST00000395859 HSF2BPO75031 334 aa13.72□□□□□ -0.21
VCPKMT-201ENST00000395859 DLSTP36957 453 aa13.72□□□□□ -0.21
VCPKMT-201ENST00000395859 ACVRL1P37023 503 aa13.72□□□□□ -0.21
VCPKMT-201ENST00000395859 STAT1P42224 750 aa13.72□□□□□ -0.21
VCPKMT-201ENST00000395859 SUOXP51687 545 aa13.72□□□□□ -0.21
VCPKMT-201ENST00000395859 NME3Q13232 169 aa13.72□□□□□ -0.21
VCPKMT-201ENST00000395859 PDCLQ13371 301 aa13.72□□□□□ -0.21
VCPKMT-201ENST00000395859 ZRANB3Q5FWF4 1079 aa13.72□□□□□ -0.21
VCPKMT-201ENST00000395859 ANKRD40Q6AI12 368 aa13.72□□□□□ -0.21
VCPKMT-201ENST00000395859 JMJD6Q6NYC1 403 aaPredicted RBP13.72□□□□□ -0.21
VCPKMT-201ENST00000395859 MCEMP1Q8IX19 187 aa13.72□□□□□ -0.21
VCPKMT-201ENST00000395859 LMO3Q8TAP4 145 aa13.72□□□□□ -0.21
VCPKMT-201ENST00000395859 NT5C3BQ969T7 300 aa13.72□□□□□ -0.21
VCPKMT-201ENST00000395859 SLC35C1Q96A29 364 aa13.72□□□□□ -0.21
VCPKMT-201ENST00000395859 RCOR3Q9P2K3 495 aaPredicted RBP13.72□□□□□ -0.21
VCPKMT-201ENST00000395859 MAPK8IP1Q9UQF2 711 aa13.72□□□□□ -0.21
VCPKMT-201ENST00000395859 MFHAS1Q9Y4C4 1052 aa13.72□□□□□ -0.21
VCPKMT-201ENST00000395859 ARHGAP10A1A4S6 786 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 759.4 ms