RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 GRIA4P48058 902 aa16.64■□□□□ 0.25
CXCL1-201ENST00000395761 LIG3P49916 1009 aa16.64■□□□□ 0.25
CXCL1-201ENST00000395761 CLDN2P57739 230 aa16.64■□□□□ 0.25
CXCL1-201ENST00000395761 LMNB2Q03252 620 aa16.64■□□□□ 0.25
CXCL1-201ENST00000395761 GRIK2Q13002 908 aa16.64■□□□□ 0.25
CXCL1-201ENST00000395761 SGCGQ13326 291 aa16.64■□□□□ 0.25
CXCL1-201ENST00000395761 KIF19Q2TAC6 998 aa16.64■□□□□ 0.25
CXCL1-201ENST00000395761 PID1Q7Z2X4 250 aa16.64■□□□□ 0.25
CXCL1-201ENST00000395761 CDKL3Q8IVW4 592 aaPredicted RBP16.64■□□□□ 0.25
CXCL1-201ENST00000395761 TMEM145Q8NBT3 493 aa16.64■□□□□ 0.25
CXCL1-201ENST00000395761 TADA1Q96BN2 335 aa16.64■□□□□ 0.25
CXCL1-201ENST00000395761 EDEM2Q9BV94 578 aa16.64■□□□□ 0.25
CXCL1-201ENST00000395761 GTPBP2Q9BX10 602 aaKnown RBP16.64■□□□□ 0.25
CXCL1-201ENST00000395761 TDRD1Q9BXT4 1180 aaKnown RBP16.64■□□□□ 0.25
CXCL1-201ENST00000395761 USP29Q9HBJ7 922 aa16.64■□□□□ 0.25
CXCL1-201ENST00000395761 KLHL8Q9P2G9 620 aaPredicted RBP16.64■□□□□ 0.25
CXCL1-201ENST00000395761 B4GALT6Q9UBX8 382 aa16.64■□□□□ 0.25
CXCL1-201ENST00000395761 COQ6Q9Y2Z9 468 aa16.64■□□□□ 0.25
CXCL1-201ENST00000395761 PI4KAP42356 2102 aa16.63■□□□□ 0.25
CXCL1-201ENST00000395761 A0A0U1RQS6 177 aa16.63■□□□□ 0.25
CXCL1-201ENST00000395761 A0A1W2PQ67 120 aa16.63■□□□□ 0.25
CXCL1-201ENST00000395761 H0Y8X5 98 aa16.63■□□□□ 0.25
CXCL1-201ENST00000395761 CDX4O14627 284 aaPredicted RBP16.63■□□□□ 0.25
CXCL1-201ENST00000395761 KCNN4O15554 427 aa16.63■□□□□ 0.25
CXCL1-201ENST00000395761 FOXD2O60548 495 aaPredicted RBP16.63■□□□□ 0.25
CXCL1-201ENST00000395761 MT-CYBP00156 380 aaPredicted RBP16.63■□□□□ 0.25
CXCL1-201ENST00000395761 ALPIP09923 528 aa16.63■□□□□ 0.25
CXCL1-201ENST00000395761 NFKB1P19838 968 aa16.63■□□□□ 0.25
CXCL1-201ENST00000395761 HNRNPA2B1P22626 353 aaKnown RBP16.63■□□□□ 0.25
CXCL1-201ENST00000395761 AKT2P31751 481 aa16.63■□□□□ 0.25
CXCL1-201ENST00000395761 STAT4Q14765 748 aa16.63■□□□□ 0.25
CXCL1-201ENST00000395761 TEAD4Q15561 434 aa16.63■□□□□ 0.25
CXCL1-201ENST00000395761 DPPA4Q7L190 304 aa16.63■□□□□ 0.25
CXCL1-201ENST00000395761 KDELC2Q7Z4H8 507 aa16.63■□□□□ 0.25
CXCL1-201ENST00000395761 TTC13Q8NBP0 860 aa16.63■□□□□ 0.25
CXCL1-201ENST00000395761 SLC35B2Q8TB61 432 aa16.63■□□□□ 0.25
CXCL1-201ENST00000395761 ATG4AQ8WYN0 398 aa16.63■□□□□ 0.25
CXCL1-201ENST00000395761 OSBPL9Q96SU4 736 aa16.63■□□□□ 0.25
CXCL1-201ENST00000395761 VAT1Q99536 393 aa16.63■□□□□ 0.25
CXCL1-201ENST00000395761 KLF6Q99612 283 aaPredicted RBP16.63■□□□□ 0.25
CXCL1-201ENST00000395761 PCDH9Q9HC56 1237 aa16.63■□□□□ 0.25
CXCL1-201ENST00000395761 UBP1Q9NZI7 540 aa16.63■□□□□ 0.25
CXCL1-201ENST00000395761 ANKRD6Q9Y2G4 727 aa16.63■□□□□ 0.25
CXCL1-201ENST00000395761 PPIL1Q9Y3C6 166 aa16.63■□□□□ 0.25
CXCL1-201ENST00000395761 SNX11Q9Y5W9 270 aa16.63■□□□□ 0.25
CXCL1-201ENST00000395761 PCDH15Q96QU1 1955 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 GOLGA8CPA6NN73 597 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 C4orf47A7E2U8 309 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 VILLO15195 856 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 CEP104O60308 925 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 TM7SF2O76062 418 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 SYPP08247 313 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 C6P13671 934 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 HNF1BP35680 557 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 STPG1Q5TH74 334 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 LIPIQ6XZB0 460 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 KDM7AQ6ZMT4 941 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 RASGEF1CQ8N431 466 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 LPCAT1Q8NF37 534 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 KIF18AQ8NI77 898 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 C1orf54Q8WWF1 131 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 ASB12Q8WXK4 309 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 CENPTQ96BT3 561 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 SCRN2Q96FV2 425 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 BMFQ96LC9 184 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 IL21RQ9HBE5 538 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 DNPEPQ9ULA0 475 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 TTC7AQ9ULT0 858 aaPredicted RBP16.62■□□□□ 0.25
CXCL1-201ENST00000395761 SAR1BQ9Y6B6 198 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 ADAMTS9Q9P2N4 1935 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 TRPM6Q9BX84 2022 aa16.62■□□□□ 0.25
CXCL1-201ENST00000395761 LAMA1P25391 3075 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 POM121BA6NF01 834 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 NPIPB15A6NHN6 443 aaPredicted RBP16.61■□□□□ 0.25
CXCL1-201ENST00000395761 TLR4O00206 839 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 LZTS3O60299 673 aaPredicted RBP16.61■□□□□ 0.25
CXCL1-201ENST00000395761 PMPCBO75439 489 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 GM2AP17900 193 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 LHCGRP22888 699 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 VIPR1P32241 457 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 CTSKP43235 329 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 C21orf59P57076 290 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 ARHGAP8P85298 464 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 SIX1Q15475 284 aaPredicted RBP16.61■□□□□ 0.25
CXCL1-201ENST00000395761 PCSK7Q16549 785 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 HLA-BQ31612 363 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 ANKRD20A2Q5SQ80 823 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 PRAMEF14Q5SWL7 426 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 ANKRD20A1Q5TYW2 823 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 ANKRD20A3Q5VUR7 823 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 GCNT7Q6ZNI0 430 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 TSPAN33Q86UF1 283 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 FAM71DQ8N9W8 422 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 MFSD2AQ8NA29 543 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 CCDC110Q8TBZ0 833 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 OXNAD1Q96HP4 312 aaPredicted RBP16.61■□□□□ 0.25
CXCL1-201ENST00000395761 LENG8Q96PV6 779 aaPredicted RBP16.61■□□□□ 0.25
CXCL1-201ENST00000395761 FCRL5Q96RD9 977 aa16.61■□□□□ 0.25
CXCL1-201ENST00000395761 MCCC1Q96RQ3 725 aaPredicted RBP16.61■□□□□ 0.25
CXCL1-201ENST00000395761 TRIB3Q96RU7 358 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms