RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 OR6P1Q8NGX9 317 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 ISL2Q96A47 359 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 GBA3Q9H227 469 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 RNF39Q9H2S5 420 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 SMARCAD1Q9H4L7 1026 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 PLEKHA5Q9HAU0 1116 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 EXD2Q9NVH0 621 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 TRAF6Q9Y4K3 522 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 TARM1B6A8C7 271 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 HBP1O60381 514 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 LINC00032P0C843 101 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 FOXA1P55317 472 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 LSM3P62310 102 aaKnown RBP14.37□□□□□ -0.11
CLIP2-203ENST00000395060 ITKQ08881 620 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 HERC3Q15034 1050 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 GPR158Q5T848 1215 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 BTBD8Q5XKL5 378 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 DCDC5Q6ZRR9 648 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 STRADAQ7RTN6 431 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 CATSPER4Q7RTX7 472 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 ERMP1Q7Z2K6 904 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 GABPB2Q8TAK5 448 aaPredicted RBP14.37□□□□□ -0.11
CLIP2-203ENST00000395060 VRTNQ9H8Y1 702 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 ZNF408Q9H9D4 720 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 SACM1LQ9NTJ5 587 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 PADI4Q9UM07 663 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 SQORQ9Y6N5 450 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 NOL3O60936 208 aaKnown RBP14.37□□□□□ -0.11
CLIP2-203ENST00000395060 CYP2C8P10632 490 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 IL10P22301 178 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 ALDH4A1P30038 563 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 NOS2P35228 1153 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 PFKPQ01813 784 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 SQLEQ14534 574 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 RFTN1Q14699 578 aaPredicted RBP14.37□□□□□ -0.11
CLIP2-203ENST00000395060 IMPG1Q17R60 797 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 PPP4R4Q6NUP7 873 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 GPRIN1Q7Z2K8 1008 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 CAMK1DQ8IU85 385 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 CROCCP3Q8IVE0 287 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 PELI3Q8N2H9 469 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 SMG8Q8ND04 991 aaKnown RBP14.37□□□□□ -0.11
CLIP2-203ENST00000395060 TANKQ92844 425 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 ZNF419Q96HQ0 510 aaPredicted RBP14.37□□□□□ -0.11
CLIP2-203ENST00000395060 ABHD8Q96I13 439 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 BIRC8Q96P09 236 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 NSUN5Q96P11 429 aaKnown RBP14.37□□□□□ -0.11
CLIP2-203ENST00000395060 MPHOSPH6Q99547 160 aaKnown RBP14.37□□□□□ -0.11
CLIP2-203ENST00000395060 OSMRQ99650 979 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 FSD1LQ9BXM9 530 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 RNF181Q9P0P0 153 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 SLAMF8Q9P0V8 285 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 ANGPT2O15123 496 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 RECQL4O94761 1208 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 BMP10O95393 424 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 CPB1P15086 417 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 PORP16435 677 aaPredicted RBP14.37□□□□□ -0.11
CLIP2-203ENST00000395060 CAPN3P20807 821 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 ATP5F1P24539 256 aaPredicted RBP14.37□□□□□ -0.11
CLIP2-203ENST00000395060 FASP25445 335 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 PSMA4P25789 261 aaKnown RBP14.37□□□□□ -0.11
CLIP2-203ENST00000395060 ARL1P40616 181 aaPredicted RBP14.37□□□□□ -0.11
CLIP2-203ENST00000395060 TBPL2Q6SJ96 375 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 IFNLR1Q8IU57 520 aaPredicted RBP14.37□□□□□ -0.11
CLIP2-203ENST00000395060 IRGQQ8WZA9 623 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 WNT8BQ93098 351 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 PPP1R10Q96QC0 940 aaKnown RBP14.37□□□□□ -0.11
CLIP2-203ENST00000395060 SLC25A23Q9BV35 468 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 TKTL2Q9H0I9 626 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 AKTIPQ9H8T0 292 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 OR12D3Q9UGF7 316 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 CD300AQ9UGN4 299 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 TRIM17Q9Y577 477 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 RLFQ13129 1914 aa14.37□□□□□ -0.11
CLIP2-203ENST00000395060 ZBBXA8MT70 800 aa14.36□□□□□ -0.11
CLIP2-203ENST00000395060 A8MU76 341 aa14.36□□□□□ -0.11
CLIP2-203ENST00000395060 ARNTP27540 789 aa14.36□□□□□ -0.11
CLIP2-203ENST00000395060 HALP42357 657 aa14.36□□□□□ -0.11
CLIP2-203ENST00000395060 MLLT10P55197 1068 aa14.36□□□□□ -0.11
CLIP2-203ENST00000395060 MAXP61244 160 aa14.36□□□□□ -0.11
CLIP2-203ENST00000395060 KCTD2Q14681 263 aa14.36□□□□□ -0.11
CLIP2-203ENST00000395060 FBXO47Q5MNV8 452 aa14.36□□□□□ -0.11
CLIP2-203ENST00000395060 PIWIL4Q7Z3Z4 852 aaKnown RBP14.36□□□□□ -0.11
CLIP2-203ENST00000395060 ZNF354CQ86Y25 554 aa14.36□□□□□ -0.11
CLIP2-203ENST00000395060 HM13Q8TCT9 377 aa14.36□□□□□ -0.11
CLIP2-203ENST00000395060 TUBGCP3Q96CW5 907 aa14.36□□□□□ -0.11
CLIP2-203ENST00000395060 FBXO5Q9UKT4 447 aa14.36□□□□□ -0.11
CLIP2-203ENST00000395060 STAP1Q9ULZ2 295 aa14.36□□□□□ -0.11
CLIP2-203ENST00000395060 NCF1BA6NI72 391 aaPredicted RBP14.36□□□□□ -0.11
CLIP2-203ENST00000395060 NCF1CA8MVU1 366 aaPredicted RBP14.36□□□□□ -0.11
CLIP2-203ENST00000395060 LRIG2O94898 1065 aa14.36□□□□□ -0.11
CLIP2-203ENST00000395060 MOCS2O96007 188 aaPredicted RBP14.36□□□□□ -0.11
CLIP2-203ENST00000395060 NCF1P14598 390 aaPredicted RBP14.36□□□□□ -0.11
CLIP2-203ENST00000395060 C9orf57Q5W0N0 161 aa14.36□□□□□ -0.11
CLIP2-203ENST00000395060 KCTD11Q693B1 232 aa14.36□□□□□ -0.11
CLIP2-203ENST00000395060 DHRSXQ8N5I4 330 aa14.36□□□□□ -0.11
CLIP2-203ENST00000395060 APPL2Q8NEU8 664 aa14.36□□□□□ -0.11
CLIP2-203ENST00000395060 AFG1LQ8WV93 481 aa14.36□□□□□ -0.11
CLIP2-203ENST00000395060 GFM2Q969S9 779 aaKnown RBP14.36□□□□□ -0.11
CLIP2-203ENST00000395060 RNF145Q96MT1 663 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms