RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 MFSD14CQ5VZR4 134 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 OR56A4Q8NGH8 313 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 DNAJB14Q8TBM8 379 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 KIFC1Q9BW19 673 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 FTHL17Q9BXU8 183 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 RNF39Q9H2S5 420 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 CHCHD3Q9NX63 227 aaKnown RBP11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 MTMR10Q9NXD2 777 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 ZDHHC7Q9NXF8 308 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 POLG2Q9UHN1 485 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 FAM50BQ9Y247 325 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 MSI1O43347 362 aaKnown RBP11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 KCNE1P15382 129 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 TWF1Q12792 350 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 FAM98BQ52LJ0 330 aaKnown RBP11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 GPR158Q5T848 1215 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 ABRAXAS1Q6UWZ7 409 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 KBTBD6Q86V97 674 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 MARVELD2Q8N4S9 558 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 MAGEE2Q8TD90 523 aaPredicted RBP11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 ZYG11BQ9C0D3 744 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 UXTQ9UBK9 157 aaPredicted RBP11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 SUCOQ9UBS9 1254 aaKnown RBP11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 BTRCQ9Y297 605 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 PKP3Q9Y446 797 aa11.71□□□□□ -0.53
UBE2D3-209ENST00000394804 BTN3A1O00481 513 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 SLC7A1P30825 629 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 CPOXP36551 454 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 TRAP1Q12931 704 aaKnown RBP11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 OGFRL1Q5TC84 451 aaPredicted RBP11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 CNSTQ6PJW8 725 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 NAPRTQ6XQN6 538 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 MAPK15Q8TD08 544 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 ASPSCR1Q9BZE9 553 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 SLC25A51Q9H1U9 297 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 COMMD8Q9NX08 183 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 GALNT8Q9NY28 637 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 FAM72CH0Y354 149 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 SNAP91O60641 907 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 H6PDO95479 791 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 IDO1P14902 403 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 TMTC4Q5T4D3 741 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 TSTD2Q5T7W7 516 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 FAM72AQ5TYM5 149 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 FAM72DQ6L9T8 149 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 SH2D5Q6ZV89 423 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 FAM72BQ86X60 149 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 DNAJC1Q96KC8 554 aaKnown RBP11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 PGLYRP2Q96PD5 576 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 KLHL5Q96PQ7 755 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 SEMA3CQ99985 751 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 GPR63Q9BZJ6 419 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 LATS2Q9NRM7 1088 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 CPA4Q9UI42 421 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 LEF1Q9UJU2 399 aaPredicted RBP11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 PAIP2BQ9ULR5 123 aaKnown RBP11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 ST3GAL5Q9UNP4 418 aa11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 EIF3LQ9Y262 564 aaKnown RBP11.71□□□□□ -0.54
UBE2D3-209ENST00000394804 SORBS2O94875 1100 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 FMO4P31512 558 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 AKT1P31749 480 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 CHRNA4P43681 627 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 SERPINB10P48595 397 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 MRPS6P82932 125 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 TLR1Q15399 786 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 FSCN1Q16658 493 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 SPOUT1Q5T280 376 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 KLHDC10Q6PID8 442 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 STK32CQ86UX6 486 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 FAM126BQ8IXS8 530 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 TOP1MTQ969P6 601 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 ROPN1LQ96C74 230 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 HGH1Q9BTY7 390 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 POLR1BQ9H9Y6 1135 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 DYTNA2CJ06 578 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 E7ENX8 843 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 ATP6V1B2P21281 511 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 SCNN1BP51168 640 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 USP46P62068 366 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 LPIN1Q14693 890 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 CCDC142Q17RM4 750 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 PATL1Q86TB9 770 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 PLGRKTQ9HBL7 147 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 KIF17Q9P2E2 1029 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 GIT1Q9Y2X7 761 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 G3V2L1 256 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 OR6B1O95007 311 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 RPLP2P05387 115 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 FAM163BP0C2L3 166 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 BRCC3P46736 316 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 CLCNKBP51801 687 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 OXCT1P55809 520 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 CEACAM7Q14002 265 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 SLC39A12Q504Y0 691 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 PKDCCQ504Y2 493 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 TP53INP2Q8IXH6 220 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 SNX31Q8N9S9 440 aa11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 ZNF512Q96ME7 567 aaPredicted RBP11.7□□□□□ -0.54
UBE2D3-209ENST00000394804 SLC2A13Q96QE2 648 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms