RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 KCNJ2P63252 427 aa7□□□□□ -1.29
RTN4-205ENST00000394609 CDH17Q12864 832 aa7□□□□□ -1.29
RTN4-205ENST00000394609 CDH18Q13634 790 aa7□□□□□ -1.29
RTN4-205ENST00000394609 BMPR2Q13873 1038 aa7□□□□□ -1.29
RTN4-205ENST00000394609 ZNF235Q14590 738 aa7□□□□□ -1.29
RTN4-205ENST00000394609 ZRSR2Q15696 482 aaKnown RBP7□□□□□ -1.29
RTN4-205ENST00000394609 TMCO4Q5TGY1 634 aa7□□□□□ -1.29
RTN4-205ENST00000394609 STEAP4Q687X5 459 aa7□□□□□ -1.29
RTN4-205ENST00000394609 TMEM214Q6NUQ4 689 aaKnown RBP7□□□□□ -1.29
RTN4-205ENST00000394609 RANBP10Q6VN20 620 aa7□□□□□ -1.29
RTN4-205ENST00000394609 HTR3DQ70Z44 454 aa7□□□□□ -1.29
RTN4-205ENST00000394609 CHST9Q7L1S5 443 aa7□□□□□ -1.29
RTN4-205ENST00000394609 LINC00523Q86TU6 105 aa7□□□□□ -1.29
RTN4-205ENST00000394609 SETD3Q86TU7 594 aaPredicted RBP7□□□□□ -1.29
RTN4-205ENST00000394609 SLC26A11Q86WA9 606 aa7□□□□□ -1.29
RTN4-205ENST00000394609 CMTM8Q8IZV2 173 aa7□□□□□ -1.29
RTN4-205ENST00000394609 TDRD5Q8NAT2 981 aaKnown RBP7□□□□□ -1.29
RTN4-205ENST00000394609 HJURPQ8NCD3 748 aaPredicted RBP7□□□□□ -1.29
RTN4-205ENST00000394609 RIN3Q8TB24 985 aa7□□□□□ -1.29
RTN4-205ENST00000394609 ARRDC2Q8TBH0 407 aa7□□□□□ -1.29
RTN4-205ENST00000394609 WFDC5Q8TCV5 224 aa7□□□□□ -1.29
RTN4-205ENST00000394609 SH3RF2Q8TEC5 729 aa7□□□□□ -1.29
RTN4-205ENST00000394609 FATE1Q969F0 183 aa7□□□□□ -1.29
RTN4-205ENST00000394609 ZNF669Q96BR6 464 aaPredicted RBP7□□□□□ -1.29
RTN4-205ENST00000394609 EXOC2Q96KP1 924 aa7□□□□□ -1.29
RTN4-205ENST00000394609 ZSWIM3Q96MP5 696 aa7□□□□□ -1.29
RTN4-205ENST00000394609 IL22Q9GZX6 179 aa7□□□□□ -1.29
RTN4-205ENST00000394609 TLE6Q9H808 572 aa7□□□□□ -1.29
RTN4-205ENST00000394609 PPCSQ9HAB8 311 aa7□□□□□ -1.29
RTN4-205ENST00000394609 FETUBQ9UGM5 382 aa7□□□□□ -1.29
RTN4-205ENST00000394609 LSM7Q9UK45 103 aaKnown RBP7□□□□□ -1.29
RTN4-205ENST00000394609 CLEC4EQ9ULY5 219 aa7□□□□□ -1.29
RTN4-205ENST00000394609 KIAA1671Q9BY89 1806 aa7□□□□□ -1.29
RTN4-205ENST00000394609 PLXNA4Q9HCM2 1894 aa7□□□□□ -1.29
RTN4-205ENST00000394609 ZCWPW2A0A1B0GU75 182 aa7□□□□□ -1.29
RTN4-205ENST00000394609 GFRA2O00451 464 aa7□□□□□ -1.29
RTN4-205ENST00000394609 XYLBO75191 536 aa7□□□□□ -1.29
RTN4-205ENST00000394609 DCTN3O75935 186 aa7□□□□□ -1.29
RTN4-205ENST00000394609 ALDH1A2O94788 518 aa7□□□□□ -1.29
RTN4-205ENST00000394609 LATS1O95835 1130 aa7□□□□□ -1.29
RTN4-205ENST00000394609 MT-ND3P03897 115 aa7□□□□□ -1.29
RTN4-205ENST00000394609 NMBRP28336 390 aa7□□□□□ -1.29
RTN4-205ENST00000394609 CSKP41240 450 aa7□□□□□ -1.29
RTN4-205ENST00000394609 RGRP47804 291 aa7□□□□□ -1.29
RTN4-205ENST00000394609 EPHA5P54756 1037 aa7□□□□□ -1.29
RTN4-205ENST00000394609 OCRLQ01968 901 aa7□□□□□ -1.29
RTN4-205ENST00000394609 MPP3Q13368 585 aa7□□□□□ -1.29
RTN4-205ENST00000394609 RASA2Q15283 850 aa7□□□□□ -1.29
RTN4-205ENST00000394609 ANKRD20A4Q4UJ75 823 aa7□□□□□ -1.29
RTN4-205ENST00000394609 MROH9Q5TGP6 573 aa7□□□□□ -1.29
RTN4-205ENST00000394609 TTC39BQ5VTQ0 682 aaPredicted RBP7□□□□□ -1.29
RTN4-205ENST00000394609 KDELC1Q6UW63 502 aa7□□□□□ -1.29
RTN4-205ENST00000394609 TMC5Q6UXY8 1006 aa7□□□□□ -1.29
RTN4-205ENST00000394609 TMEM135Q86UB9 458 aa7□□□□□ -1.29
RTN4-205ENST00000394609 CCNJLQ8IV13 435 aa7□□□□□ -1.29
RTN4-205ENST00000394609 KLHDC8BQ8IXV7 354 aa7□□□□□ -1.29
RTN4-205ENST00000394609 ZNF398Q8TD17 642 aa7□□□□□ -1.29
RTN4-205ENST00000394609 MZB1Q8WU39 189 aa7□□□□□ -1.29
RTN4-205ENST00000394609 USP13Q92995 863 aaPredicted RBP7□□□□□ -1.29
RTN4-205ENST00000394609 ATP2A3Q93084 1043 aa7□□□□□ -1.29
RTN4-205ENST00000394609 TTC17Q96AE7 1141 aa7□□□□□ -1.29
RTN4-205ENST00000394609 IFT43Q96FT9 208 aa7□□□□□ -1.29
RTN4-205ENST00000394609 SERAC1Q96JX3 654 aa7□□□□□ -1.29
RTN4-205ENST00000394609 MAGEB18Q96M61 343 aa7□□□□□ -1.29
RTN4-205ENST00000394609 SMC6Q96SB8 1091 aa7□□□□□ -1.29
RTN4-205ENST00000394609 PAIP2Q9BPZ3 127 aaKnown RBP7□□□□□ -1.29
RTN4-205ENST00000394609 FEM1AQ9BSK4 669 aa7□□□□□ -1.29
RTN4-205ENST00000394609 NAT9Q9BTE0 207 aa7□□□□□ -1.29
RTN4-205ENST00000394609 TUBB6Q9BUF5 446 aa7□□□□□ -1.29
RTN4-205ENST00000394609 ACE2Q9BYF1 805 aaPredicted RBP7□□□□□ -1.29
RTN4-205ENST00000394609 PBX4Q9BYU1 374 aa7□□□□□ -1.29
RTN4-205ENST00000394609 POLR1EQ9GZS1 481 aaKnown RBP7□□□□□ -1.29
RTN4-205ENST00000394609 NKX2-4Q9H2Z4 354 aa7□□□□□ -1.29
RTN4-205ENST00000394609 TASP1Q9H6P5 420 aa7□□□□□ -1.29
RTN4-205ENST00000394609 DCLRE1BQ9H816 532 aa7□□□□□ -1.29
RTN4-205ENST00000394609 UBA2Q9UBT2 640 aaPredicted RBP7□□□□□ -1.29
RTN4-205ENST00000394609 VPS28Q9UK41 221 aa7□□□□□ -1.29
RTN4-205ENST00000394609 ATXN7L1Q9ULK2 861 aaPredicted RBP7□□□□□ -1.29
RTN4-205ENST00000394609 LRCH1Q9Y2L9 728 aa7□□□□□ -1.29
RTN4-205ENST00000394609 STARD13Q9Y3M8 1113 aa7□□□□□ -1.29
RTN4-205ENST00000394609 PSAT1Q9Y617 370 aa7□□□□□ -1.29
RTN4-205ENST00000394609 SHROOM3Q8TF72 1996 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 IQANK1A0A1B0GTG1 560 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 FAM237BA0A1B0GVD1 139 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 MAGEB16A2A368 324 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 TYW5A2RUC4 315 aaKnown RBP6.99□□□□□ -1.29
RTN4-205ENST00000394609 EME2A4GXA9 379 aaPredicted RBP6.99□□□□□ -1.29
RTN4-205ENST00000394609 ENO4A6NNW6 628 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 TRIM49D1C9J1S8 452 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 RFXAPO00287 272 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 SMIM24O75264 130 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 USP1O94782 785 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 PRAMEF12O95522 483 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 MT-CO1P00395 513 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 TPBGLP0DKB5 382 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 RPA3P35244 121 aaPredicted RBP6.99□□□□□ -1.29
RTN4-205ENST00000394609 NRIP1P48552 1158 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 SCNN1BP51168 640 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 ARF5P84085 180 aa6.99□□□□□ -1.29
RTN4-205ENST00000394609 MGAT5Q09328 741 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms