RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 AP1S1P61966 158 aa15.02□□□□□ -0.01
CCT4-201ENST00000394440 IRX4P78413 519 aa15.02□□□□□ -0.01
CCT4-201ENST00000394440 SHHQ15465 462 aa15.02□□□□□ -0.01
CCT4-201ENST00000394440 TAF1AQ15573 450 aaPredicted RBP15.02□□□□□ -0.01
CCT4-201ENST00000394440 LACTB2Q53H82 288 aaPredicted RBP15.02□□□□□ -0.01
CCT4-201ENST00000394440 FASTKD1Q53R41 847 aaKnown RBP15.02□□□□□ -0.01
CCT4-201ENST00000394440 ATXN7L2Q5T6C5 722 aaPredicted RBP15.02□□□□□ -0.01
CCT4-201ENST00000394440 ATG16L1Q676U5 607 aa15.02□□□□□ -0.01
CCT4-201ENST00000394440 TMEM25Q86YD3 366 aa15.02□□□□□ -0.01
CCT4-201ENST00000394440 CEP97Q8IW35 865 aa15.02□□□□□ -0.01
CCT4-201ENST00000394440 LPCAT1Q8NF37 534 aa15.02□□□□□ -0.01
CCT4-201ENST00000394440 ZNF398Q8TD17 642 aa15.02□□□□□ -0.01
CCT4-201ENST00000394440 DPP7Q9UHL4 492 aa15.02□□□□□ -0.01
CCT4-201ENST00000394440 CCDC195A0A1B0GUA6 201 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 BUD23O43709 281 aaKnown RBP15.01□□□□□ -0.01
CCT4-201ENST00000394440 ZNF821O75541 412 aaPredicted RBP15.01□□□□□ -0.01
CCT4-201ENST00000394440 S1PR4O95977 384 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 GOT2P00505 430 aaKnown RBP15.01□□□□□ -0.01
CCT4-201ENST00000394440 NEFHP12036 1026 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 CSNK1DP48730 415 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 CLCN5P51795 746 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 PGGT1BP53609 377 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 TAS2R39P59534 338 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 RAB10P61026 200 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 ZNF697Q5TEC3 545 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 CCDC121Q6ZUS5 278 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 CENPLQ8N0S6 344 aaPredicted RBP15.01□□□□□ -0.01
CCT4-201ENST00000394440 OR6P1Q8NGX9 317 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 ZSWIM3Q96MP5 696 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 SMIM14Q96QK8 99 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 OMDQ99983 421 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 ADGRE3Q9BY15 652 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 SUDS3Q9H7L9 328 aaPredicted RBP15.01□□□□□ -0.01
CCT4-201ENST00000394440 CCDC162PA2VCL2 907 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 COL6A2P12110 1019 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 CEBPBP17676 345 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 TMPRSS15P98073 1019 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 POU4F1Q01851 419 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 TAF1BQ53T94 588 aaPredicted RBP15.01□□□□□ -0.01
CCT4-201ENST00000394440 PITRM1Q5JRX3 1037 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 RBM20Q5T481 1227 aaKnown RBP15.01□□□□□ -0.01
CCT4-201ENST00000394440 GLT6D1Q7Z4J2 308 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 METTL3Q86U44 580 aaKnown RBP15.01□□□□□ -0.01
CCT4-201ENST00000394440 TMEM151AQ8N4L1 468 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 OTUD6BQ8N6M0 293 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 OR6Y1Q8NGX8 325 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 VOPP1Q96AW1 172 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 THOC1Q96FV9 657 aaKnown RBP15.01□□□□□ -0.01
CCT4-201ENST00000394440 CDKN2AIPNLQ96HQ2 116 aa15.01□□□□□ -0.01
CCT4-201ENST00000394440 TRANK1O15050 2925 aa15□□□□□ -0.01
CCT4-201ENST00000394440 TRIOBPQ9H2D6 2365 aa15□□□□□ -0.01
CCT4-201ENST00000394440 STMN1P16949 149 aa15□□□□□ -0.01
CCT4-201ENST00000394440 SLC20A2Q08357 652 aa15□□□□□ -0.01
CCT4-201ENST00000394440 OVGP1Q12889 678 aa15□□□□□ -0.01
CCT4-201ENST00000394440 ASTLQ6HA08 431 aaPredicted RBP15□□□□□ -0.01
CCT4-201ENST00000394440 PNPLA1Q8N8W4 532 aa15□□□□□ -0.01
CCT4-201ENST00000394440 TM6SF2Q9BZW4 377 aa15□□□□□ -0.01
CCT4-201ENST00000394440 C20orf27Q9GZN8 174 aa15□□□□□ -0.01
CCT4-201ENST00000394440 NPHS2Q9NP85 383 aa15□□□□□ -0.01
CCT4-201ENST00000394440 TLK1Q9UKI8 766 aa15□□□□□ -0.01
CCT4-201ENST00000394440 USH1CQ9Y6N9 552 aa15□□□□□ -0.01
CCT4-201ENST00000394440 LAMA3Q16787 3333 aa15□□□□□ -0.01
CCT4-201ENST00000394440 G3V2L1 256 aa15□□□□□ -0.01
CCT4-201ENST00000394440 ZNF197O14709 1029 aa15□□□□□ -0.01
CCT4-201ENST00000394440 TROVE2P10155 538 aaKnown RBP eCLIP15□□□□□ -0.01
CCT4-201ENST00000394440 OGNP20774 298 aaKnown RBP15□□□□□ -0.01
CCT4-201ENST00000394440 KCNA4P22459 653 aa15□□□□□ -0.01
CCT4-201ENST00000394440 CRABP2P29373 138 aa15□□□□□ -0.01
CCT4-201ENST00000394440 SLC8A1P32418 973 aa15□□□□□ -0.01
CCT4-201ENST00000394440 SEMA3AQ14563 771 aa15□□□□□ -0.01
CCT4-201ENST00000394440 ZNF460Q14592 562 aa15□□□□□ -0.01
CCT4-201ENST00000394440 FUT11Q495W5 492 aa15□□□□□ -0.01
CCT4-201ENST00000394440 RNF187Q5TA31 235 aaPredicted RBP15□□□□□ -0.01
CCT4-201ENST00000394440 RAPH1Q70E73 1250 aa15□□□□□ -0.01
CCT4-201ENST00000394440 RBM23Q86U06 439 aaKnown RBP15□□□□□ -0.01
CCT4-201ENST00000394440 TTC30BQ8N4P2 665 aa15□□□□□ -0.01
CCT4-201ENST00000394440 GPATCH11Q8N954 259 aa15□□□□□ -0.01
CCT4-201ENST00000394440 IRF7Q92985 503 aa15□□□□□ -0.01
CCT4-201ENST00000394440 ELMO2Q96JJ3 720 aa15□□□□□ -0.01
CCT4-201ENST00000394440 NMRAL1Q9HBL8 299 aa15□□□□□ -0.01
CCT4-201ENST00000394440 SPHK2Q9NRA0 654 aa15□□□□□ -0.01
CCT4-201ENST00000394440 TBC1D14Q9P2M4 693 aa15□□□□□ -0.01
CCT4-201ENST00000394440 HS3ST2Q9Y278 367 aa15□□□□□ -0.01
CCT4-201ENST00000394440 PRRC2BQ5JSZ5 2229 aaKnown RBP14.99□□□□□ -0.01
CCT4-201ENST00000394440 TRAFD1O14545 582 aaPredicted RBP14.99□□□□□ -0.01
CCT4-201ENST00000394440 WISP3O95389 354 aaPredicted RBP14.99□□□□□ -0.01
CCT4-201ENST00000394440 GLP2RO95838 553 aa14.99□□□□□ -0.01
CCT4-201ENST00000394440 SBK3P0C264 359 aa14.99□□□□□ -0.01
CCT4-201ENST00000394440 SRCP12931 536 aa14.99□□□□□ -0.01
CCT4-201ENST00000394440 SAT1P21673 171 aa14.99□□□□□ -0.01
CCT4-201ENST00000394440 MAGEA10P43363 369 aaPredicted RBP14.99□□□□□ -0.01
CCT4-201ENST00000394440 TYSND1Q2T9J0 566 aa14.99□□□□□ -0.01
CCT4-201ENST00000394440 ZCCHC23Q6ZST2 131 aa14.99□□□□□ -0.01
CCT4-201ENST00000394440 LDB1Q86U70 411 aaPredicted RBP14.99□□□□□ -0.01
CCT4-201ENST00000394440 C10orf107Q8IVU9 208 aa14.99□□□□□ -0.01
CCT4-201ENST00000394440 ARID3BQ8IVW6 561 aaPredicted RBP14.99□□□□□ -0.01
CCT4-201ENST00000394440 FITM2Q8N6M3 262 aa14.99□□□□□ -0.01
CCT4-201ENST00000394440 RFWD2Q8NHY2 731 aa14.99□□□□□ -0.01
CCT4-201ENST00000394440 KCTD4Q8WVF5 259 aa14.99□□□□□ -0.01
CCT4-201ENST00000394440 OTUB2Q96DC9 234 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms