RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 INSIG1O15503 277 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 KLHL41O60662 606 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 MT-CO1P00395 513 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 JUNP05412 331 aaKnown RBP15.13■□□□□ 0.01
GPC3-202ENST00000394299 CDKN1CP49918 316 aaPredicted RBP15.13■□□□□ 0.01
GPC3-202ENST00000394299 ACBD5Q5T8D3 534 aaPredicted RBP15.13■□□□□ 0.01
GPC3-202ENST00000394299 TMC7Q7Z402 723 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 PHTF2Q8N3S3 785 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 CALML6Q8TD86 181 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 BRSK1Q8TDC3 778 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 ZNF599Q96NL3 588 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 HERC2P3Q9BVR0 1158 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 IL21Q9HBE4 155 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.13■□□□□ 0.01
GPC3-202ENST00000394299 LOC100653049A0A140TA62 436 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 ABHD14A-ACY1A0A1B0GW23 586 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 TMEM233B4DJY2 109 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 H0Y626 953 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 K7ERQ8 282 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 GREM1O60565 184 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 KRT34O76011 436 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 NDST3O95803 873 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 FGF1P05230 155 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 HDCP19113 662 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 CR2P20023 1033 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 HLA-DPA1P20036 260 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 ACCSLQ4AC99 568 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 GPR158Q5T848 1215 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 KIAA0408Q6ZU52 694 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 DDX53Q86TM3 631 aaKnown RBP15.13■□□□□ 0.01
GPC3-202ENST00000394299 TRMT2BQ96GJ1 504 aaKnown RBP15.13■□□□□ 0.01
GPC3-202ENST00000394299 YME1L1Q96TA2 773 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 TUBB6Q9BUF5 446 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 DRC3Q9H069 523 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 MRPL17Q9NRX2 175 aaKnown RBP15.13■□□□□ 0.01
GPC3-202ENST00000394299 TBC1D30Q9Y2I9 924 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 CPQQ9Y646 472 aa15.13■□□□□ 0.01
GPC3-202ENST00000394299 H0Y3Z8 333 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 CD3EAPO15446 510 aaKnown RBP15.12■□□□□ 0.01
GPC3-202ENST00000394299 CNPP09543 421 aaKnown RBP15.12■□□□□ 0.01
GPC3-202ENST00000394299 COL6A2P12110 1019 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 HNRNPLP14866 589 aaKnown RBP eCLIP15.12■□□□□ 0.011e-7■■■□□ 15.8
GPC3-202ENST00000394299 EPHB3P54753 998 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 TIAL1Q01085 375 aaKnown RBP eCLIP15.12■□□□□ 0.011e-7■■■■■ 45.2
GPC3-202ENST00000394299 FAM91A1Q658Y4 838 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 EPGNQ6UW88 154 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 GAREM2Q75VX8 874 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 MAB21L3Q8N8X9 362 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 LPCAT1Q8NF37 534 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 WDR60Q8WVS4 1066 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 CEP295NLQ96MC4 621 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 ILKAPQ9H0C8 392 aaPredicted RBP15.12■□□□□ 0.01
GPC3-202ENST00000394299 MRPL46Q9H2W6 279 aaKnown RBP15.12■□□□□ 0.01
GPC3-202ENST00000394299 BPIFA1Q9NP55 256 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 SCUBE2Q9NQ36 999 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 DNAJC28Q9NX36 388 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 TAGLN3Q9UI15 199 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 CLEC4EQ9ULY5 219 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 FCF1Q9Y324 198 aaKnown RBP15.12■□□□□ 0.01
GPC3-202ENST00000394299 CHD5Q8TDI0 1954 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 TMEM114B3SHH9 223 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 TGM5O43548 720 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 ZBTB14O43829 449 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 ZMPSTE24O75844 475 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 GLP2RO95838 553 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 ALOX15P16050 662 aaPredicted RBP15.12■□□□□ 0.01
GPC3-202ENST00000394299 TFEBP19484 476 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 EPHA3P29320 983 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 ABL2P42684 1182 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 CFAP157Q5JU67 520 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 ALG1LQ6GMV1 187 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 TCEAL8Q8IYN2 117 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 OR4K2Q8NGD2 314 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 PHF21BQ96EK2 531 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 CDKN2AIPNLQ96HQ2 116 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 NUF2Q9BZD4 464 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 SMG9Q9H0W8 520 aaKnown RBP15.12■□□□□ 0.01
GPC3-202ENST00000394299 POMKQ9H5K3 350 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.12■□□□□ 0.015e-23■■■□□ 14.8
GPC3-202ENST00000394299 ANAPC1Q9H1A4 1944 aa15.12■□□□□ 0.01
GPC3-202ENST00000394299 GRID2O43424 1007 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 DCXO43602 365 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 PEX11AO75192 247 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 TMCC1O94876 653 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 EPOP01588 193 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 APOA4P06727 396 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 ARSAP15289 507 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 GABRR2P28476 465 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 CLCN5P51795 746 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 KHDC1Q4VXA5 237 aaKnown RBP15.11■□□□□ 0.01
GPC3-202ENST00000394299 ATXN7L2Q5T6C5 722 aaPredicted RBP15.11■□□□□ 0.01
GPC3-202ENST00000394299 C1orf53Q5VUE5 145 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 BBS5Q8N3I7 341 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 OR6K2Q8NGY2 324 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 FAM96AQ9H5X1 160 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 TNFRSF12AQ9NP84 129 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 FIS1Q9Y3D6 152 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 RAI2Q9Y5P3 530 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 DOCK6Q96HP0 2047 aa15.11■□□□□ 0.01
GPC3-202ENST00000394299 A0A087X1B8 175 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms