RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 SHBGP04278 402 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 POLBP06746 335 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 ABHD2P08910 425 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 PSMD8P48556 350 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 LRRC73Q5JTD7 316 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 PARS2Q7L3T8 475 aaKnown RBP24.37■■□□□ 1.49
LRFN4-202ENST00000393952 IQCKQ8N0W5 287 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 ZNF687Q8N1G0 1237 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 MDGA1Q8NFP4 955 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 OR2W6PQ8NHA6 318 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 ARRDC3Q96B67 414 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 CD320Q9NPF0 282 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 SLC2A6Q9UGQ3 507 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 ARL5AQ9Y689 179 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 MROH6A6NGR9 719 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 CAPN8A6NHC0 703 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 C16orf96A6NNT2 1141 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 BUD23O43709 281 aaKnown RBP24.37■■□□□ 1.49
LRFN4-202ENST00000393952 SPAG6O75602 509 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 SASH3O75995 380 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 USP1O94782 785 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 GSTA2P09210 222 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 HOXB2P14652 356 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 TIMP2P16035 220 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 COL9A1P20849 921 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 HNF1BP35680 557 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 STARD3Q14849 445 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 SPANXN3Q5MJ09 141 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 TSTD2Q5T7W7 516 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 GLT6D1Q7Z4J2 308 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 UBALD2Q8IYN6 164 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 GJD3Q8N144 294 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 GSDMBQ8TAX9 411 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 FBF1Q8TES7 1133 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 ZBTB9Q96C00 473 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 RSPH9Q9H1X1 276 aaPredicted RBP24.37■■□□□ 1.49
LRFN4-202ENST00000393952 MAGEE1Q9HCI5 957 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 MUTYHQ9UIF7 546 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 PPIL1Q9Y3C6 166 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 ZNF711Q9Y462 761 aa24.37■■□□□ 1.49
LRFN4-202ENST00000393952 A0A087WUV0 522 aaPredicted RBP24.36■■□□□ 1.49
LRFN4-202ENST00000393952 TCRBV9S1A1TA0A576 114 aa24.36■■□□□ 1.49
LRFN4-202ENST00000393952 TRIOO75962 3097 aa24.36■■□□□ 1.49
LRFN4-202ENST00000393952 SLC4A1P02730 911 aa24.36■■□□□ 1.49
LRFN4-202ENST00000393952 NUDT17P0C025 328 aa24.36■■□□□ 1.49
LRFN4-202ENST00000393952 CHRNB1P11230 501 aa24.36■■□□□ 1.49
LRFN4-202ENST00000393952 TARSP26639 723 aaKnown RBP24.36■■□□□ 1.49
LRFN4-202ENST00000393952 PHBP35232 272 aa24.36■■□□□ 1.49
LRFN4-202ENST00000393952 SEMG2Q02383 582 aa24.36■■□□□ 1.49
LRFN4-202ENST00000393952 UGP2Q16851 508 aa24.36■■□□□ 1.49
LRFN4-202ENST00000393952 ARMC3Q5W041 872 aa24.36■■□□□ 1.49
LRFN4-202ENST00000393952 ESRP1Q6NXG1 681 aaKnown RBP24.36■■□□□ 1.49
LRFN4-202ENST00000393952 TRMT10BQ6PF06 316 aaKnown RBP24.36■■□□□ 1.49
LRFN4-202ENST00000393952 UNC5BQ8IZJ1 945 aa24.36■■□□□ 1.49
LRFN4-202ENST00000393952 SIX5Q8N196 739 aa24.36■■□□□ 1.49
LRFN4-202ENST00000393952 TTC30BQ8N4P2 665 aa24.36■■□□□ 1.49
LRFN4-202ENST00000393952 HCAR2Q8TDS4 363 aa24.36■■□□□ 1.49
LRFN4-202ENST00000393952 ZIM3Q96PE6 472 aa24.36■■□□□ 1.49
LRFN4-202ENST00000393952 HACD3Q9P035 362 aa24.36■■□□□ 1.49
LRFN4-202ENST00000393952 MTF2Q9Y483 593 aaPredicted RBP24.36■■□□□ 1.49
LRFN4-202ENST00000393952 ZCWPW2A0A1B0GU75 182 aa24.35■■□□□ 1.49
LRFN4-202ENST00000393952 A0A1W2PQF6 199 aa24.35■■□□□ 1.49
LRFN4-202ENST00000393952 NPIPB15A6NHN6 443 aaPredicted RBP24.35■■□□□ 1.49
LRFN4-202ENST00000393952 UPK3BL1B0FP48 263 aa24.35■■□□□ 1.49
LRFN4-202ENST00000393952 UPK3BL2E5RIL1 263 aa24.35■■□□□ 1.49
LRFN4-202ENST00000393952 C1QTNF3-AMACRE9PGA6 284 aa24.35■■□□□ 1.49
LRFN4-202ENST00000393952 MAP2K7O14733 419 aa24.35■■□□□ 1.49
LRFN4-202ENST00000393952 ITGB7P26010 798 aa24.35■■□□□ 1.49
LRFN4-202ENST00000393952 STARD6P59095 220 aa24.35■■□□□ 1.49
LRFN4-202ENST00000393952 POLR2LP62875 67 aaKnown RBP24.35■■□□□ 1.49
LRFN4-202ENST00000393952 TAF1AQ15573 450 aaPredicted RBP24.35■■□□□ 1.49
LRFN4-202ENST00000393952 Q6ZS52 159 aa24.35■■□□□ 1.49
LRFN4-202ENST00000393952 USP45Q70EL2 814 aa24.35■■□□□ 1.49
LRFN4-202ENST00000393952 LYSMD3Q7Z3D4 306 aa24.35■■□□□ 1.49
LRFN4-202ENST00000393952 CACUL1Q86Y37 369 aa24.35■■□□□ 1.49
LRFN4-202ENST00000393952 NDUFAF2Q8N183 169 aa24.35■■□□□ 1.49
LRFN4-202ENST00000393952 OR2T3Q8NH03 318 aa24.35■■□□□ 1.49
LRFN4-202ENST00000393952 SCRN2Q96FV2 425 aa24.35■■□□□ 1.49
LRFN4-202ENST00000393952 SHDQ96IW2 340 aa24.35■■□□□ 1.49
LRFN4-202ENST00000393952 MCCC1Q96RQ3 725 aaPredicted RBP24.35■■□□□ 1.49
LRFN4-202ENST00000393952 LTB4R2Q9NPC1 389 aa24.35■■□□□ 1.49
LRFN4-202ENST00000393952 TREX1Q9NSU2 369 aa24.35■■□□□ 1.49
LRFN4-202ENST00000393952 MRPS17Q9Y2R5 130 aaKnown RBP24.35■■□□□ 1.49
LRFN4-202ENST00000393952 NFS1Q9Y697 457 aa24.35■■□□□ 1.49
LRFN4-202ENST00000393952 FAM169AQ9Y6X4 670 aa24.35■■□□□ 1.49
LRFN4-202ENST00000393952 A8MX80 341 aa24.34■■□□□ 1.49
LRFN4-202ENST00000393952 PLK4O00444 970 aa24.34■■□□□ 1.49
LRFN4-202ENST00000393952 CRTAMO95727 393 aa24.34■■□□□ 1.49
LRFN4-202ENST00000393952 SATB1Q01826 763 aa24.34■■□□□ 1.49
LRFN4-202ENST00000393952 LAMB3Q13751 1172 aa24.34■■□□□ 1.49
LRFN4-202ENST00000393952 PTPRCAPQ14761 206 aa24.34■■□□□ 1.49
LRFN4-202ENST00000393952 UBXN2BQ14CS0 331 aa24.34■■□□□ 1.49
LRFN4-202ENST00000393952 SMAD1Q15797 465 aaKnown RBP24.34■■□□□ 1.49
LRFN4-202ENST00000393952 NLRP9Q7RTR0 991 aa24.34■■□□□ 1.49
LRFN4-202ENST00000393952 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.34■■□□□ 1.49
LRFN4-202ENST00000393952 TRABDQ9H4I3 376 aa24.34■■□□□ 1.49
LRFN4-202ENST00000393952 POLR3BQ9NW08 1133 aaPredicted RBP24.34■■□□□ 1.49
LRFN4-202ENST00000393952 RABGEF1Q9UJ41 708 aa24.34■■□□□ 1.49
LRFN4-202ENST00000393952 KANSL1LA0AUZ9 987 aa24.33■■□□□ 1.49
LRFN4-202ENST00000393952 RNASEH1O60930 286 aaKnown RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms