RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 PDLIM1O00151 329 aa18.93■□□□□ 0.62
CBX1-202ENST00000393408 NRP2O60462 931 aa18.93■□□□□ 0.62
CBX1-202ENST00000393408 WISP3O95389 354 aaPredicted RBP18.93■□□□□ 0.62
CBX1-202ENST00000393408 IMPDH1P20839 514 aa18.93■□□□□ 0.62
CBX1-202ENST00000393408 SERPINH1P50454 418 aaKnown RBP18.93■□□□□ 0.62
CBX1-202ENST00000393408 IRF5Q13568 498 aa18.93■□□□□ 0.62
CBX1-202ENST00000393408 ADRM1Q16186 407 aa18.93■□□□□ 0.62
CBX1-202ENST00000393408 PABPC1LQ4VXU2 614 aaKnown RBP18.93■□□□□ 0.62
CBX1-202ENST00000393408 FAM219BQ5XKK7 198 aa18.93■□□□□ 0.62
CBX1-202ENST00000393408 LARP4Q71RC2 724 aaKnown RBP eCLIP18.93■□□□□ 0.624e-6■■□□□ 14.5
CBX1-202ENST00000393408 AMIGO2Q86SJ2 522 aa18.93■□□□□ 0.62
CBX1-202ENST00000393408 C14orf80Q86SX3 495 aa18.93■□□□□ 0.62
CBX1-202ENST00000393408 HERC6Q8IVU3 1022 aa18.93■□□□□ 0.62
CBX1-202ENST00000393408 OR13J1Q8NGT2 312 aa18.93■□□□□ 0.62
CBX1-202ENST00000393408 TMEM209Q96SK2 561 aa18.93■□□□□ 0.62
CBX1-202ENST00000393408 KATNAL1Q9BW62 490 aa18.93■□□□□ 0.62
CBX1-202ENST00000393408 HACD3Q9P035 362 aa18.93■□□□□ 0.62
CBX1-202ENST00000393408 ATXN10Q9UBB4 475 aa18.93■□□□□ 0.62
CBX1-202ENST00000393408 CROTQ9UKG9 612 aa18.93■□□□□ 0.62
CBX1-202ENST00000393408 A0A1B0GTW7 788 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 TRPA1O75762 1119 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 SRP72O76094 671 aaKnown RBP18.92■□□□□ 0.62
CBX1-202ENST00000393408 PEX11BO96011 259 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 YWHAQP27348 245 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 PAN2Q504Q3 1202 aaKnown RBP18.92■□□□□ 0.62
CBX1-202ENST00000393408 SAMD4BQ5PRF9 694 aaKnown RBP18.92■□□□□ 0.62
CBX1-202ENST00000393408 CLEC6AQ6EIG7 209 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 GALNT7Q86SF2 657 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 METTL23Q86XA0 190 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 LRRC49Q8IUZ0 686 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 OR9I1Q8NGQ6 314 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 OR10T2Q8NGX3 314 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 GABPB2Q8TAK5 448 aaPredicted RBP18.92■□□□□ 0.62
CBX1-202ENST00000393408 TRMOQ9BU70 441 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 OSBPL11Q9BXB4 747 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 NOL6Q9H6R4 1146 aaKnown RBP18.92■□□□□ 0.62
CBX1-202ENST00000393408 GIT1Q9Y2X7 761 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 VWA7Q9Y334 891 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 CYP11A1P05108 521 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 BRCC3P46736 316 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 ATP4BP51164 291 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 MTX3Q5HYI7 312 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 HMBOX1Q6NT76 420 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 TAF2Q6P1X5 1199 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 TMEM207Q6UWW9 146 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 LAYNQ6UX15 382 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 CYP2R1Q6VVX0 501 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 CARM1Q86X55 608 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 CILP2Q8IUL8 1156 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 ALDH16A1Q8IZ83 802 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 L3HYPDHQ96EM0 354 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 IMP4Q96G21 291 aaKnown RBP18.92■□□□□ 0.62
CBX1-202ENST00000393408 SNX13Q9Y5W8 968 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 HS3ST4Q9Y661 456 aa18.92■□□□□ 0.62
CBX1-202ENST00000393408 PAPSS2O95340 614 aaPredicted RBP18.91■□□□□ 0.62
CBX1-202ENST00000393408 FGFR3P22607 806 aa18.91■□□□□ 0.62
CBX1-202ENST00000393408 KCNC1P48547 511 aa18.91■□□□□ 0.62
CBX1-202ENST00000393408 ACADVLP49748 655 aa18.91■□□□□ 0.62
CBX1-202ENST00000393408 TMEM259Q4ZIN3 620 aa18.91■□□□□ 0.62
CBX1-202ENST00000393408 PARK7Q99497 189 aaKnown RBP18.91■□□□□ 0.62
CBX1-202ENST00000393408 SLC29A1Q99808 456 aa18.91■□□□□ 0.62
CBX1-202ENST00000393408 ALG9Q9H6U8 611 aa18.91■□□□□ 0.62
CBX1-202ENST00000393408 CNOT6Q9ULM6 557 aaKnown RBP18.91■□□□□ 0.62
CBX1-202ENST00000393408 ARHGAP10A1A4S6 786 aa18.91■□□□□ 0.62
CBX1-202ENST00000393408 ARHGEF37A1IGU5 675 aa18.91■□□□□ 0.62
CBX1-202ENST00000393408 MOCS2O96007 188 aaPredicted RBP18.91■□□□□ 0.62
CBX1-202ENST00000393408 PENKP01210 267 aaPredicted RBP18.91■□□□□ 0.62
CBX1-202ENST00000393408 CDKN2DP55273 166 aa18.91■□□□□ 0.62
CBX1-202ENST00000393408 ZNF678Q5SXM1 525 aa18.91■□□□□ 0.62
CBX1-202ENST00000393408 SCD5Q86SK9 330 aa18.91■□□□□ 0.62
CBX1-202ENST00000393408 FUNDC1Q8IVP5 155 aa18.91■□□□□ 0.62
CBX1-202ENST00000393408 EZH1Q92800 747 aaPredicted RBP18.91■□□□□ 0.62
CBX1-202ENST00000393408 PBXIP1Q96AQ6 731 aa18.91■□□□□ 0.62
CBX1-202ENST00000393408 DNAJC1Q96KC8 554 aaKnown RBP18.91■□□□□ 0.62
CBX1-202ENST00000393408 AP5M1Q9H0R1 490 aa18.91■□□□□ 0.62
CBX1-202ENST00000393408 TRPV2Q9Y5S1 764 aa18.91■□□□□ 0.62
CBX1-202ENST00000393408 WASH4PA8MWX3 477 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 MT-CO1P00395 513 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 TSPAN8P19075 237 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 SLC5A3P53794 718 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 NRG1Q02297 640 aaPredicted RBP18.9■□□□□ 0.62
CBX1-202ENST00000393408 MORN1Q5T089 497 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 GPR158Q5T848 1215 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 IRAK1BP1Q5VVH5 260 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 CD300LGQ6UXG3 332 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 ISCA2Q86U28 154 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 TSPAN14Q8NG11 270 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 B4GALNT2Q8NHY0 566 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 ZNF408Q9H9D4 720 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 FBRSL1Q9HCM7 1045 aaKnown RBP18.9■□□□□ 0.62
CBX1-202ENST00000393408 NT5MQ9NPB1 228 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 NUDT5Q9UKK9 219 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.9■□□□□ 0.62
CBX1-202ENST00000393408 TRPM7Q96QT4 1865 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 MYO16Q9Y6X6 1858 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 ATP6AP2A0A1C7CYW4 349 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 M0QZ92 97 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 SLC7A4O43246 635 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 ATP6AP2O75787 350 aa18.9■□□□□ 0.62
CBX1-202ENST00000393408 B3GAT3O94766 335 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms