RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 ESRP1Q6NXG1 681 aaKnown RBP10.91□□□□□ -0.66
BRF1-204ENST00000392557 NCSTNQ92542 709 aa10.91□□□□□ -0.66
BRF1-204ENST00000392557 EIF2B3Q9NR50 452 aaKnown RBP10.91□□□□□ -0.66
BRF1-204ENST00000392557 DNAAF2Q9NVR5 837 aaKnown RBP10.91□□□□□ -0.66
BRF1-204ENST00000392557 ARHGEF38Q9NXL2 777 aa10.91□□□□□ -0.66
BRF1-204ENST00000392557 RRN3Q9NYV6 651 aa10.91□□□□□ -0.66
BRF1-204ENST00000392557 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.91□□□□□ -0.66
BRF1-204ENST00000392557 RIMS3Q9UJD0 308 aa10.91□□□□□ -0.66
BRF1-204ENST00000392557 PHF24Q9UPV7 400 aa10.91□□□□□ -0.66
BRF1-204ENST00000392557 ZNF236Q9UL36 1845 aa10.91□□□□□ -0.66
BRF1-204ENST00000392557 SHROOM3Q8TF72 1996 aa10.9□□□□□ -0.66
BRF1-204ENST00000392557 TRPM7Q96QT4 1865 aa10.9□□□□□ -0.66
BRF1-204ENST00000392557 SLCO1B7G3V0H7 640 aa10.9□□□□□ -0.66
BRF1-204ENST00000392557 PDLIM1O00151 329 aa10.9□□□□□ -0.66
BRF1-204ENST00000392557 GATMP50440 423 aa10.9□□□□□ -0.66
BRF1-204ENST00000392557 UGP2Q16851 508 aa10.9□□□□□ -0.66
BRF1-204ENST00000392557 MGAT5BQ3V5L5 792 aa10.9□□□□□ -0.66
BRF1-204ENST00000392557 KCTD21Q4G0X4 260 aa10.9□□□□□ -0.66
BRF1-204ENST00000392557 SMYD5Q6GMV2 418 aa10.9□□□□□ -0.66
BRF1-204ENST00000392557 GPR141Q7Z602 305 aa10.9□□□□□ -0.66
BRF1-204ENST00000392557 HCSTQ9UBK5 93 aa10.9□□□□□ -0.66
BRF1-204ENST00000392557 CROCCQ5TZA2 2017 aa10.9□□□□□ -0.66
BRF1-204ENST00000392557 BCAS2O75934 225 aaPredicted RBP10.9□□□□□ -0.66
BRF1-204ENST00000392557 ALDH1A1P00352 501 aa10.9□□□□□ -0.66
BRF1-204ENST00000392557 ALOX15P16050 662 aaPredicted RBP10.9□□□□□ -0.66
BRF1-204ENST00000392557 SLC5A2P31639 672 aa10.9□□□□□ -0.66
BRF1-204ENST00000392557 CDH13P55290 713 aa10.9□□□□□ -0.66
BRF1-204ENST00000392557 RAB10P61026 200 aa10.9□□□□□ -0.66
BRF1-204ENST00000392557 TRIM25Q14258 630 aaKnown RBP10.9□□□□□ -0.66
BRF1-204ENST00000392557 MRPL10Q7Z7H8 261 aaKnown RBP10.9□□□□□ -0.66
BRF1-204ENST00000392557 DHFR2Q86XF0 187 aa10.9□□□□□ -0.66
BRF1-204ENST00000392557 PPHLN1Q8NEY8 458 aaKnown RBP10.9□□□□□ -0.66
BRF1-204ENST00000392557 CAPNS2Q96L46 248 aa10.9□□□□□ -0.66
BRF1-204ENST00000392557 MRPL46Q9H2W6 279 aaKnown RBP10.9□□□□□ -0.66
BRF1-204ENST00000392557 RHOJQ9H4E5 214 aa10.9□□□□□ -0.66
BRF1-204ENST00000392557 IGSF9Q9P2J2 1179 aa10.9□□□□□ -0.66
BRF1-204ENST00000392557 MYO9BQ13459 2157 aa10.9□□□□□ -0.66
BRF1-204ENST00000392557 HHLA1C9JL84 531 aa10.9□□□□□ -0.67
BRF1-204ENST00000392557 CCL22O00626 93 aa10.9□□□□□ -0.67
BRF1-204ENST00000392557 ZNF623O75123 536 aa10.9□□□□□ -0.67
BRF1-204ENST00000392557 CLIC3O95833 236 aa10.9□□□□□ -0.67
BRF1-204ENST00000392557 CSE1LP55060 971 aaKnown RBP10.9□□□□□ -0.67
BRF1-204ENST00000392557 TAS2R39P59534 338 aa10.9□□□□□ -0.67
BRF1-204ENST00000392557 DPYSQ14117 519 aa10.9□□□□□ -0.67
BRF1-204ENST00000392557 MYBPC3Q14896 1274 aa10.9□□□□□ -0.67
BRF1-204ENST00000392557 TBCELQ5QJ74 424 aa10.9□□□□□ -0.67
BRF1-204ENST00000392557 ARHGAP36Q6ZRI8 547 aa10.9□□□□□ -0.67
BRF1-204ENST00000392557 ZC3HC1Q86WB0 502 aaKnown RBP10.9□□□□□ -0.67
BRF1-204ENST00000392557 MIB1Q86YT6 1006 aa10.9□□□□□ -0.67
BRF1-204ENST00000392557 ATAD1Q8NBU5 361 aa10.9□□□□□ -0.67
BRF1-204ENST00000392557 NT5C3BQ969T7 300 aa10.9□□□□□ -0.67
BRF1-204ENST00000392557 MPP6Q9NZW5 540 aa10.9□□□□□ -0.67
BRF1-204ENST00000392557 CROTQ9UKG9 612 aa10.9□□□□□ -0.67
BRF1-204ENST00000392557 PDCD11Q14690 1871 aaKnown RBP10.89□□□□□ -0.67
BRF1-204ENST00000392557 C9IYK1 514 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 NOL3O60936 208 aaKnown RBP10.89□□□□□ -0.67
BRF1-204ENST00000392557 MT-ND1P03886 318 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 UGT1A6P19224 532 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 YWHAQP27348 245 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 STT3AP46977 705 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 NPY2RP49146 381 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 NOGQ13253 232 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 FUT11Q495W5 492 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 LDB1Q86U70 411 aaPredicted RBP10.89□□□□□ -0.67
BRF1-204ENST00000392557 TMEM135Q86UB9 458 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 RTN4RL1Q86UN2 441 aaPredicted RBP10.89□□□□□ -0.67
BRF1-204ENST00000392557 CEP97Q8IW35 865 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 LRRC43Q8N309 656 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 KLHDC9Q8NEP7 349 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 HEXDCQ8WVB3 486 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 SLC29A1Q99808 456 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 TRIM8Q9BZR9 551 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 GMPR2Q9P2T1 348 aaKnown RBP10.89□□□□□ -0.67
BRF1-204ENST00000392557 SLC2A6Q9UGQ3 507 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 SLC27A5Q9Y2P5 690 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 MAGEB16A2A368 324 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 DCLK1O15075 740 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 F9P00740 461 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 IGHA2P01877 340 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 CCDC166P0CW27 439 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 CDK4P11802 303 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 CPB1P15086 417 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 MAPRE2Q15555 327 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 NOMO2Q5JPE7 1267 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 ACBD5Q5T8D3 534 aaPredicted RBP10.89□□□□□ -0.67
BRF1-204ENST00000392557 FAM171A1Q5VUB5 890 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 DCLRE1AQ6PJP8 1040 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 TFAP2DQ7Z6R9 452 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 ATPAF2Q8N5M1 289 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 TTC9BQ8N6N2 239 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 MLPHQ9BV36 600 aaPredicted RBP10.89□□□□□ -0.67
BRF1-204ENST00000392557 FBRSL1Q9HCM7 1045 aaKnown RBP10.89□□□□□ -0.67
BRF1-204ENST00000392557 SPAG4Q9NPE6 437 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 RCOR3Q9P2K3 495 aaPredicted RBP10.89□□□□□ -0.67
BRF1-204ENST00000392557 DSEQ9UL01 958 aa10.89□□□□□ -0.67
BRF1-204ENST00000392557 A0A1W2PQH9 124 aa10.88□□□□□ -0.67
BRF1-204ENST00000392557 C7orf72A4D263 438 aa10.88□□□□□ -0.67
BRF1-204ENST00000392557 SLC35E2BP0CK96 405 aa10.88□□□□□ -0.67
BRF1-204ENST00000392557 KPNA2P52292 529 aaKnown RBP10.88□□□□□ -0.67
BRF1-204ENST00000392557 MBTPS1Q14703 1052 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms