RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 PSMD11O00231 422 aa12.73□□□□□ -0.37
GGPS1-203ENST00000391855 NME1P15531 152 aaKnown RBP12.73□□□□□ -0.37
GGPS1-203ENST00000391855 ITIH2P19823 946 aa12.73□□□□□ -0.37
GGPS1-203ENST00000391855 VIPR1P32241 457 aa12.73□□□□□ -0.37
GGPS1-203ENST00000391855 CTNNA1P35221 906 aaKnown RBP12.73□□□□□ -0.37
GGPS1-203ENST00000391855 PEX5P50542 639 aa12.73□□□□□ -0.37
GGPS1-203ENST00000391855 NAP1L1P55209 391 aaKnown RBP12.73□□□□□ -0.37
GGPS1-203ENST00000391855 COPS2P61201 443 aa12.73□□□□□ -0.37
GGPS1-203ENST00000391855 RPL26P61254 145 aaKnown RBP12.73□□□□□ -0.37
GGPS1-203ENST00000391855 KIF5AQ12840 1032 aa12.73□□□□□ -0.37
GGPS1-203ENST00000391855 SLC10A2Q12908 348 aaPredicted RBP12.73□□□□□ -0.37
GGPS1-203ENST00000391855 MTM1Q13496 603 aa12.73□□□□□ -0.37
GGPS1-203ENST00000391855 PDE1CQ14123 709 aaPredicted RBP12.73□□□□□ -0.37
GGPS1-203ENST00000391855 IRF4Q15306 451 aa12.73□□□□□ -0.37
GGPS1-203ENST00000391855 HS1BP3Q53T59 392 aa12.73□□□□□ -0.37
GGPS1-203ENST00000391855 LIPIQ6XZB0 460 aa12.73□□□□□ -0.37
GGPS1-203ENST00000391855 GATAD2AQ86YP4 633 aa12.73□□□□□ -0.37
GGPS1-203ENST00000391855 ACRBPQ8NEB7 543 aa12.73□□□□□ -0.37
GGPS1-203ENST00000391855 PDCD6IPQ8WUM4 868 aaKnown RBP12.73□□□□□ -0.37
GGPS1-203ENST00000391855 TBATAQ96M53 351 aa12.73□□□□□ -0.37
GGPS1-203ENST00000391855 MCCC1Q96RQ3 725 aaPredicted RBP12.73□□□□□ -0.37
GGPS1-203ENST00000391855 B4GALT6Q9UBX8 382 aa12.73□□□□□ -0.37
GGPS1-203ENST00000391855 RPL26L1Q9UNX3 145 aaKnown RBP12.73□□□□□ -0.37
GGPS1-203ENST00000391855 TFR2Q9UP52 801 aa12.73□□□□□ -0.37
GGPS1-203ENST00000391855 BTBD3Q9Y2F9 522 aa12.73□□□□□ -0.37
GGPS1-203ENST00000391855 TTLL3Q9Y4R7 772 aa12.73□□□□□ -0.37
GGPS1-203ENST00000391855 RAI2Q9Y5P3 530 aa12.73□□□□□ -0.37
GGPS1-203ENST00000391855 hCG_1818297A0A087WSY0 165 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 RCCD1A6NED2 376 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 NEMP2A6NFY4 417 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 MTSS1O43312 755 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 FZD6O60353 706 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 CST8O60676 142 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 PIAS2O75928 621 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 CSF2P04141 144 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 HLA-DQB2P05538 268 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 FTH1P19P0C7X4 201 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 ALPPL2P10696 532 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 CDK4P11802 303 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 CTNNA2P26232 953 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 CETN2P41208 172 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 DYNLT1P63172 113 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 AP1B1Q10567 949 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 FOXC1Q12948 553 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 ARHGEF7Q14155 803 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 SLC14A2Q15849 920 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 MACC1Q6ZN28 852 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 KANSL1Q7Z3B3 1105 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 CCDC50Q8IVM0 306 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 RAVER1Q8IY67 606 aaKnown RBP12.72□□□□□ -0.37
GGPS1-203ENST00000391855 SYCE1Q8N0S2 351 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 CCDC112Q8NEF3 446 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 KIAA1524Q8TCG1 905 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 UBE2Q2Q8WVN8 375 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 BTN2A2Q8WVV5 523 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 ADAMTS14Q8WXS8 1223 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 SCRN2Q96FV2 425 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 NSMCE3Q96MG7 304 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 LGMNQ99538 433 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 TDRD1Q9BXT4 1180 aaKnown RBP12.72□□□□□ -0.37
GGPS1-203ENST00000391855 GOLPH3Q9H4A6 298 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 DNAJC28Q9NX36 388 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 SALL4Q9UJQ4 1053 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 EFR3BQ9Y2G0 817 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 PPIL1Q9Y3C6 166 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 PCDHGA1Q9Y5H4 931 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 LAMA1P25391 3075 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 CABIN1Q9Y6J0 2220 aa12.72□□□□□ -0.37
GGPS1-203ENST00000391855 KCNK1O00180 336 aa12.71□□□□□ -0.37
GGPS1-203ENST00000391855 RECQL5O94762 991 aaPredicted RBP12.71□□□□□ -0.37
GGPS1-203ENST00000391855 HEXIM1O94992 359 aaKnown RBP12.71□□□□□ -0.37
GGPS1-203ENST00000391855 LDOC1O95751 146 aaPredicted RBP12.71□□□□□ -0.37
GGPS1-203ENST00000391855 JCHAINP01591 159 aa12.71□□□□□ -0.37
GGPS1-203ENST00000391855 PRKCGP05129 697 aa12.71□□□□□ -0.37
GGPS1-203ENST00000391855 ZNF30P17039 623 aa12.71□□□□□ -0.37
GGPS1-203ENST00000391855 HTR1BP28222 390 aa12.71□□□□□ -0.37
GGPS1-203ENST00000391855 BLKP51451 505 aa12.71□□□□□ -0.37
GGPS1-203ENST00000391855 EPHB1P54762 984 aa12.71□□□□□ -0.37
GGPS1-203ENST00000391855 DSC2Q02487 901 aa12.71□□□□□ -0.37
GGPS1-203ENST00000391855 BNIP3Q12983 259 aa12.71□□□□□ -0.37
GGPS1-203ENST00000391855 FZD2Q14332 565 aa12.71□□□□□ -0.37
GGPS1-203ENST00000391855 WSCD2Q2TBF2 565 aa12.71□□□□□ -0.37
GGPS1-203ENST00000391855 ARRDC2Q8TBH0 407 aa12.71□□□□□ -0.37
GGPS1-203ENST00000391855 P3H4Q92791 437 aa12.71□□□□□ -0.37
GGPS1-203ENST00000391855 CNDP2Q96KP4 475 aaKnown RBP12.71□□□□□ -0.37
GGPS1-203ENST00000391855 DUSP23Q9BVJ7 150 aa12.71□□□□□ -0.37
GGPS1-203ENST00000391855 TSGA10Q9BZW7 698 aa12.71□□□□□ -0.37
GGPS1-203ENST00000391855 LACRTQ9GZZ8 138 aa12.71□□□□□ -0.37
GGPS1-203ENST00000391855 MBNL1Q9NR56 388 aaKnown RBP12.71□□□□□ -0.37
GGPS1-203ENST00000391855 EVA1BQ9NVM1 165 aa12.71□□□□□ -0.37
GGPS1-203ENST00000391855 METRNQ9UJH8 293 aa12.71□□□□□ -0.37
GGPS1-203ENST00000391855 COQ6Q9Y2Z9 468 aa12.71□□□□□ -0.37
GGPS1-203ENST00000391855 PCDHA3Q9Y5H8 950 aa12.71□□□□□ -0.37
GGPS1-203ENST00000391855 CSNK1G3Q9Y6M4 447 aa12.71□□□□□ -0.37
GGPS1-203ENST00000391855 KNL1Q8NG31 2342 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 A0A0J9YYE9 177 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 TTC24A2A3L6 582 aaPredicted RBP12.71□□□□□ -0.38
GGPS1-203ENST00000391855 MIF4GDA9UHW6 222 aaKnown RBP12.71□□□□□ -0.38
GGPS1-203ENST00000391855 HACD1B0YJ81 288 aa12.71□□□□□ -0.38
GGPS1-203ENST00000391855 ENC1O14682 589 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms