RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 NOXA1Q86UR1 476 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 ZCCHC9Q8N567 271 aaKnown RBP3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 BEST2Q8NFU1 509 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 HTRA1Q92743 480 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 ZNF570Q96NI8 536 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 BBS4Q96RK4 519 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 H2AFJQ9BTM1 129 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 NUF2Q9BZD4 464 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 MAGEE1Q9HCI5 957 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 PLSCR4Q9NRQ2 329 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 SAGE1Q9NXZ1 904 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 SMARCAL1Q9NZC9 954 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 MPP6Q9NZW5 540 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 KCNG2Q9UJ96 466 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 CDC14AQ9UNH5 594 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 FAM96BQ9Y3D0 163 aa3.69□□□□□ -1.82
SNORA40.3-201ENST00000390964 SAA2-SAA4A0A096LPE2 208 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 TEX13CA0A0J9YWL9 993 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 hDV102S1A0JD36 115 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 IFITM10A6NMD0 228 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 TFP02787 698 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 SRCP12931 536 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 DDX5P17844 614 aaKnown RBP3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 XBP1P17861 261 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 STX2P32856 288 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 GALNT2Q10471 571 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 ILF3Q12906 894 aaKnown RBP eCLIP3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 RNPS1Q15287 305 aaKnown RBP3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 EFNB3Q15768 340 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 ZNF672Q499Z4 452 aaPredicted RBP3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 SGO1Q5FBB7 561 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 C9orf50Q5SZB4 431 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 LRRC8EQ6NSJ5 796 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 LINGO2Q7L985 606 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 RFLNBQ8N5W9 214 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 CREB3L4Q8TEY5 395 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 LBHD1Q9BQE6 289 aaPredicted RBP3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 HEMGNQ9BXL5 484 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 PLEKHA4Q9H4M7 779 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 RETREG1Q9H6L5 497 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 MKKSQ9NPJ1 570 aaPredicted RBP3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 WASH6PQ9NQA3 447 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 DDX4Q9NQI0 724 aaKnown RBP3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 KCND2Q9NZV8 630 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 PDP2Q9P2J9 529 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 CTNNAL1Q9UBT7 734 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 SLC9A2Q9UBY0 812 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 ICAM5Q9UMF0 924 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 A4GNTQ9UNA3 340 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 SNX9Q9Y5X1 595 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 DOCK7Q96N67 2140 aa3.68□□□□□ -1.82
SNORA40.3-201ENST00000390964 SCN5AQ14524 2016 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 BCAT2O15382 392 aaPredicted RBP3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 NDUFS7O75251 213 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 TIPRLO75663 272 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 CLDN14O95500 239 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 PMS2P2O95744 297 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 PYGLP06737 847 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 HOXB5P09067 269 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 MT3P25713 68 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 SHMT1P34896 483 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 GGT5P36269 586 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 PPP2R5BQ15173 497 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 OASLQ15646 514 aaKnown RBP3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 ZRSR1Q15695 479 aaKnown RBP3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 ATP13A5Q4VNC0 1218 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 SLC9B1Q4ZJI4 515 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 PLEKHA7Q6IQ23 1121 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 B3GNT6Q6ZMB0 384 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 Q6ZTC4 211 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 MTSS1LQ765P7 747 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 CUZD1Q86UP6 607 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 EXOC3L1Q86VI1 746 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 NR2C2APQ86WQ0 139 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 DHX40Q8IX18 779 aaKnown RBP3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 SPATA3Q8NHX4 192 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 MAGEC3Q8TD91 643 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 WFIKKN2Q8TEU8 576 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 RNF125Q96EQ8 232 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 KLHL15Q96M94 604 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 IL17FQ96PD4 163 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 SLITRK1Q96PX8 696 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 C17orf75Q9HAS0 396 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 VEZTQ9HBM0 779 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 BPIFA1Q9NP55 256 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 MALT1Q9UDY8 824 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 LSM4Q9Y4Z0 139 aaKnown RBP3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 CYP46A1Q9Y6A2 500 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 STON1Q9Y6Q2 735 aa3.67□□□□□ -1.82
SNORA40.3-201ENST00000390964 A0A1W2PQM1 296 aa3.66□□□□□ -1.82
SNORA40.3-201ENST00000390964 TMEM202A6NGA9 273 aa3.66□□□□□ -1.82
SNORA40.3-201ENST00000390964 TTC36A6NLP5 189 aa3.66□□□□□ -1.82
SNORA40.3-201ENST00000390964 PLRG1O43660 514 aaKnown RBP3.66□□□□□ -1.82
SNORA40.3-201ENST00000390964 KRT86O43790 486 aa3.66□□□□□ -1.82
SNORA40.3-201ENST00000390964 RFPL2O75678 378 aa3.66□□□□□ -1.82
SNORA40.3-201ENST00000390964 AFPP02771 609 aaKnown RBP3.66□□□□□ -1.82
SNORA40.3-201ENST00000390964 F7P08709 466 aaPredicted RBP3.66□□□□□ -1.82
SNORA40.3-201ENST00000390964 LINC00271P0C7V0 271 aa3.66□□□□□ -1.82
SNORA40.3-201ENST00000390964 PAFAH1B1P43034 410 aa3.66□□□□□ -1.82
SNORA40.3-201ENST00000390964 DLX5P56178 289 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms