RNA–Protein interactions for RNA: ENST00000390601.3

IGHV3-11-201, Transcript of immunoglobulin heavy variable 3-11 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene IGHV3-11, Length 473 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-11-201ENST00000390601 STX1AQ16623 288 aa12.65□□□□□ -0.38
IGHV3-11-201ENST00000390601 RBM43Q6ZSC3 357 aaKnown RBP12.65□□□□□ -0.38
IGHV3-11-201ENST00000390601 RAB11FIP2Q7L804 512 aa12.65□□□□□ -0.38
IGHV3-11-201ENST00000390601 TAF8Q7Z7C8 310 aa12.65□□□□□ -0.38
IGHV3-11-201ENST00000390601 CAMK1DQ8IU85 385 aa12.65□□□□□ -0.38
IGHV3-11-201ENST00000390601 KYQ8NBH2 561 aa12.65□□□□□ -0.38
IGHV3-11-201ENST00000390601 OR56A4Q8NGH8 313 aa12.65□□□□□ -0.38
IGHV3-11-201ENST00000390601 CCNL2Q96S94 520 aaPredicted RBP12.65□□□□□ -0.38
IGHV3-11-201ENST00000390601 CINPQ9BW66 212 aaPredicted RBP12.65□□□□□ -0.38
IGHV3-11-201ENST00000390601 SLC39A8Q9C0K1 460 aa12.65□□□□□ -0.38
IGHV3-11-201ENST00000390601 LRRN3Q9H3W5 708 aa12.65□□□□□ -0.38
IGHV3-11-201ENST00000390601 DHX35Q9H5Z1 703 aaKnown RBP12.65□□□□□ -0.38
IGHV3-11-201ENST00000390601 LMBRD1Q9NUN5 540 aa12.65□□□□□ -0.38
IGHV3-11-201ENST00000390601 SEPT10Q9P0V9 454 aa12.65□□□□□ -0.38
IGHV3-11-201ENST00000390601 SIRPGQ9P1W8 387 aa12.65□□□□□ -0.38
IGHV3-11-201ENST00000390601 APPL1Q9UKG1 709 aa12.65□□□□□ -0.38
IGHV3-11-201ENST00000390601 PNMA8BQ9ULN7 279 aaPredicted RBP12.65□□□□□ -0.38
IGHV3-11-201ENST00000390601 AP4E1Q9UPM8 1137 aa12.65□□□□□ -0.38
IGHV3-11-201ENST00000390601 COQ6Q9Y2Z9 468 aa12.65□□□□□ -0.38
IGHV3-11-201ENST00000390601 OR1A2Q9Y585 309 aa12.65□□□□□ -0.38
IGHV3-11-201ENST00000390601 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 A0A1W2PNU3 283 aaPredicted RBP12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 D6RAR5 112 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 GOLGA6L22H0YM25 854 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 J3KR12 359 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 PRPSAP2O60256 369 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 BUB1BO60566 1050 aaPredicted RBP12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 RECQL5O94762 991 aaPredicted RBP12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 PCCBP05166 539 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 RPLP0P05388 317 aaKnown RBP12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 JMJD7P0C870 316 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 HSPA9P38646 679 aaKnown RBP12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 HCAR3P49019 387 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 IL10RBQ08334 325 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 MAMLD1Q13495 774 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 ARHGEF7Q14155 803 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 AFMIDQ63HM1 303 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 OGFOD3Q6PK18 319 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 PCSK4Q6UW60 755 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 RFX8Q6ZV50 586 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 BBS5Q8N3I7 341 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 NETO2Q8NC67 525 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 FAM46DQ8NEK8 389 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 GPR156Q8NFN8 814 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 FNIP1Q8TF40 1166 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 TTC9Q92623 222 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 ECHDC3Q96DC8 303 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 MED8Q96G25 268 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 CELF6Q96J87 481 aaKnown RBP12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 ZNF599Q96NL3 588 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 GBP4Q96PP9 640 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 NAT10Q9H0A0 1025 aaKnown RBP12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 EPB41L5Q9HCM4 733 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 AKAP7Q9P0M2 348 aaPredicted RBP12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 SEPT3Q9UH03 358 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 ACSL6Q9UKU0 697 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 ATXN7L1Q9ULK2 861 aaPredicted RBP12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 RP1P56715 2156 aa12.64□□□□□ -0.39
IGHV3-11-201ENST00000390601 J3QKU1 62 aa12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 DFFAO00273 331 aa12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 NVLO15381 856 aaKnown RBP12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 CELA2BP08218 269 aaPredicted RBP12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 GZMAP12544 262 aa12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 ATP1A3P13637 1013 aa12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 SLC5A2P31639 672 aa12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 UGT1A5P35504 534 aa12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 TRIM23P36406 574 aa12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 PDX1P52945 283 aa12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 CCL7P80098 99 aa12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 CLPPQ16740 277 aaPredicted RBP12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 ZSCAN23Q3MJ62 389 aa12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 CERCAMQ5T4B2 595 aa12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 PLEKHA7Q6IQ23 1121 aa12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 LIPIQ6XZB0 460 aa12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 DPPA4Q7L190 304 aa12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 CCNJLQ8IV13 435 aa12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 TSEN2Q8NCE0 465 aaKnown RBP12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 KIAA1524Q8TCG1 905 aa12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 SPOCK2Q92563 424 aa12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 PSKH2Q96QS6 385 aa12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 CMKLR1Q99788 373 aa12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 WDR26Q9H7D7 661 aa12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 ZWILCHQ9H900 591 aa12.63□□□□□ -0.39
IGHV3-11-201ENST00000390601 A0A1W2PQM1 296 aa12.62□□□□□ -0.39
IGHV3-11-201ENST00000390601 TMEM191CA6NGB0 347 aa12.62□□□□□ -0.39
IGHV3-11-201ENST00000390601 B8ZZF3 427 aa12.62□□□□□ -0.39
IGHV3-11-201ENST00000390601 NUDT21O43809 227 aaKnown RBP12.62□□□□□ -0.39
IGHV3-11-201ENST00000390601 KRT10P13645 584 aa12.62□□□□□ -0.39
IGHV3-11-201ENST00000390601 ERCC2P18074 760 aa12.62□□□□□ -0.39
IGHV3-11-201ENST00000390601 SCNN1BP51168 640 aa12.62□□□□□ -0.39
IGHV3-11-201ENST00000390601 OGDHQ02218 1023 aa12.62□□□□□ -0.39
IGHV3-11-201ENST00000390601 CLN3Q13286 438 aa12.62□□□□□ -0.39
IGHV3-11-201ENST00000390601 LBRQ14739 615 aaKnown RBP12.62□□□□□ -0.39
IGHV3-11-201ENST00000390601 ACOX1Q15067 660 aa12.62□□□□□ -0.39
IGHV3-11-201ENST00000390601 C14orf28Q4W4Y0 310 aa12.62□□□□□ -0.39
IGHV3-11-201ENST00000390601 PPP6R3Q5H9R7 873 aaPredicted RBP12.62□□□□□ -0.39
IGHV3-11-201ENST00000390601 RALGPS1Q5JS13 557 aa12.62□□□□□ -0.39
IGHV3-11-201ENST00000390601 TMEM164Q5U3C3 297 aa12.62□□□□□ -0.39
IGHV3-11-201ENST00000390601 PNCKQ6P2M8 343 aa12.62□□□□□ -0.39
IGHV3-11-201ENST00000390601 IRF2BP2Q7Z5L9 587 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms