RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 A0A0B4J203 849 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 CCDC195A0A1B0GUA6 201 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 KIAA1324LA8MWY0 1029 aaPredicted RBP6.54□□□□□ -1.36
TRAV35-201ENST00000390462 KPNA7A9QM74 516 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 H0YC42 278 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 IFNL4K9M1U5 179 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 VWA5AO00534 786 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 SLC30A4O14863 429 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 CLIC2O15247 247 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 CCNT1O60563 726 aaKnown RBP6.54□□□□□ -1.36
TRAV35-201ENST00000390462 AKAP3O75969 853 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 TRUB2O95900 331 aaKnown RBP6.54□□□□□ -1.36
TRAV35-201ENST00000390462 ALDOAP04075 364 aaKnown RBP6.54□□□□□ -1.36
TRAV35-201ENST00000390462 FAM58BPP0C7Q3 252 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 GZMAP12544 262 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 ETS1P14921 441 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 POU1F1P28069 291 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 TMOD1P28289 359 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 CXCR5P32302 372 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 SUOXP51687 545 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 ST8SIA6P61647 398 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 CCNA1P78396 465 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 FAM187BQ17R55 369 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 GEN1Q17RS7 908 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 BOLA3Q53S33 107 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 C6orf163Q5TEZ5 329 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 SLC9A4Q6AI14 798 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 SFRP4Q6FHJ7 346 aaPredicted RBP6.54□□□□□ -1.36
TRAV35-201ENST00000390462 FIP1L1Q6UN15 594 aaKnown RBP6.54□□□□□ -1.36
TRAV35-201ENST00000390462 CACNA2D4Q7Z3S7 1137 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 NBPF5PQ86XG9 351 aaPredicted RBP6.54□□□□□ -1.36
TRAV35-201ENST00000390462 CLYBLQ8N0X4 340 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 ENDOVQ8N8Q3 282 aaKnown RBP6.54□□□□□ -1.36
TRAV35-201ENST00000390462 SUPT20HQ8NEM7 779 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 OR7G3Q8NG95 312 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 URGCPQ8TCY9 931 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 OSCP1Q8WVF1 389 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 SLC5A11Q8WWX8 675 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 LPGAT1Q92604 370 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 ZNF75CPQ92670 426 aaPredicted RBP6.54□□□□□ -1.36
TRAV35-201ENST00000390462 ARHGEF26Q96DR7 871 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 ALG14Q96F25 216 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 TMEM176AQ96HP8 235 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 FBXL20Q96IG2 436 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 GDAP1L1Q96MZ0 367 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 ZNF558Q96NG5 402 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 C1QTNF1Q9BXJ1 281 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 HDHD5Q9BXW7 423 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 ACPTQ9BZG2 426 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 ZNF350Q9GZX5 532 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 OR10A2Q9H208 303 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 GOLPH3LQ9H4A5 285 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 NCOR1P1Q9H4R4 102 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 KIF9Q9HAQ2 790 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 PCDH18Q9HCL0 1135 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 RANGRFQ9HD47 186 aaPredicted RBP6.54□□□□□ -1.36
TRAV35-201ENST00000390462 HOXC10Q9NYD6 342 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 PLK2Q9NYY3 685 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.54□□□□□ -1.36
TRAV35-201ENST00000390462 PCSK1NQ9UHG2 260 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 STX8Q9UNK0 236 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 EXO1Q9UQ84 846 aaKnown RBP6.54□□□□□ -1.36
TRAV35-201ENST00000390462 SSX2IPQ9Y2D8 614 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 CMAHPQ9Y471 501 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 LRP5O75197 1615 aa6.54□□□□□ -1.36
TRAV35-201ENST00000390462 SCAF11Q99590 1463 aaKnown RBP6.53□□□□□ -1.36
TRAV35-201ENST00000390462 CEP152O94986 1710 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 FAM205AQ6ZU69 1335 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 MIA2Q96PC5 1412 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 ZSCAN5CA6NGD5 496 aaPredicted RBP6.53□□□□□ -1.36
TRAV35-201ENST00000390462 USP17L23D6RBM5 183 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 O00370 1275 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 HOXA3O43365 443 aaPredicted RBP6.53□□□□□ -1.36
TRAV35-201ENST00000390462 HBP1O60381 514 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 CELF2O95319 508 aaKnown RBP6.53□□□□□ -1.36
TRAV35-201ENST00000390462 TPBGLP0DKB5 382 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 IRF1P10914 325 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 HSPA5P11021 654 aaKnown RBP6.53□□□□□ -1.36
TRAV35-201ENST00000390462 MMP9P14780 707 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 CTNNB1P35222 781 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 GJC1P36383 396 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 GABRB2P47870 512 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 TRA2BP62995 288 aaKnown RBP6.53□□□□□ -1.36
TRAV35-201ENST00000390462 PRKCEQ02156 737 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 ACSM2AQ08AH3 577 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 TMEM62Q0P6H9 643 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 CETN1Q12798 172 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 SNAPC1Q16533 368 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 TAZQ16635 292 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 TBR1Q16650 682 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 ST3GAL2Q16842 350 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 LY6KQ17RY6 165 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 PCGF3Q3KNV8 242 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 FUT11Q495W5 492 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 GXYLT1Q4G148 440 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 FBXO43Q4G163 708 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 USP39Q53GS9 565 aaKnown RBP6.53□□□□□ -1.36
TRAV35-201ENST00000390462 DNTTIP2Q5QJE6 756 aaKnown RBP6.53□□□□□ -1.36
TRAV35-201ENST00000390462 C6orf136Q5SQH8 315 aa6.53□□□□□ -1.36
TRAV35-201ENST00000390462 ACSM2BQ68CK6 577 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms