RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 L1CAMP32004 1257 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 IL12RB1P42701 662 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 DDX39BQ13838 428 aaKnown RBP14.31□□□□□ -0.12
RTF1-201ENST00000389629 IKBKEQ14164 716 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 THOC7Q6I9Y2 204 aaKnown RBP14.31□□□□□ -0.12
RTF1-201ENST00000389629 TMEM53Q6P2H8 277 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 GATAD2AQ86YP4 633 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 TBC1D21Q8IYX1 336 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 TRMT13Q9NUP7 481 aaKnown RBP14.31□□□□□ -0.12
RTF1-201ENST00000389629 IGSF9Q9P2J2 1179 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 EBF1Q9UH73 591 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 POLG2Q9UHN1 485 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 HNRNPCL2B2RXH8 293 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 SLC25A52Q3SY17 297 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 OTOP3Q7RTS5 596 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 THAP5Q7Z6K1 395 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 PPM1MQ96MI6 270 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 DPY30Q9C005 99 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 ST14Q9Y5Y6 855 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 TNFRSF21O75509 655 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 NMBRP28336 390 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 GRIK4Q16099 956 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 TMEM110Q86TL2 294 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 C18orf25Q96B23 403 aaPredicted RBP14.31□□□□□ -0.12
RTF1-201ENST00000389629 PHF21AQ96BD5 680 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 ASB9Q96DX5 294 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 FBXL20Q96IG2 436 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 CACYBPQ9HB71 228 aaKnown RBP14.31□□□□□ -0.12
RTF1-201ENST00000389629 WWOXQ9NZC7 414 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 INVSQ9Y283 1065 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 IPPQ9Y573 584 aa14.31□□□□□ -0.12
RTF1-201ENST00000389629 HEMK1Q9Y5R4 338 aaPredicted RBP14.31□□□□□ -0.12
RTF1-201ENST00000389629 SH3PXD2BA1X283 911 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 K7EPI3 171 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 MTHFD1P11586 935 aaKnown RBP14.3□□□□□ -0.12
RTF1-201ENST00000389629 NPR3P17342 541 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 RPS12P25398 132 aaKnown RBP14.3□□□□□ -0.12
RTF1-201ENST00000389629 IDH2P48735 452 aaKnown RBP14.3□□□□□ -0.12
RTF1-201ENST00000389629 BCAP31P51572 246 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 COPZ1P61923 177 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 SIM2Q14190 667 aaPredicted RBP14.3□□□□□ -0.12
RTF1-201ENST00000389629 STRADAQ7RTN6 431 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 ABI1Q8IZP0 508 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 PQLC3Q8N755 202 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 AMER2Q8N7J2 671 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 HDAC10Q969S8 669 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 TSEN34Q9BSV6 310 aaKnown RBP14.3□□□□□ -0.12
RTF1-201ENST00000389629 HGH1Q9BTY7 390 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 B3GAT3O94766 335 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 AP2A1O95782 977 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 GUCA1CO95843 209 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 FADS2O95864 444 aaKnown RBP14.3□□□□□ -0.12
RTF1-201ENST00000389629 DHRS4L1P0CG22 281 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 KPNA1P52294 538 aaPredicted RBP14.3□□□□□ -0.12
RTF1-201ENST00000389629 RPL26P61254 145 aaKnown RBP14.3□□□□□ -0.12
RTF1-201ENST00000389629 DNASE1L3Q13609 305 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 CCNYL2Q5T2Q4 361 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 ADHFE1Q8IWW8 467 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 USP29Q9HBJ7 922 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 CDC14AQ9UNH5 594 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 PNMA8CA0A1B0GUJ8 204 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 MYO1DO94832 1006 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 CAPGP40121 348 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 SP2Q02086 613 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 TJAP1Q5JTD0 557 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 CEP78Q5JTW2 689 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 EPGNQ6UW88 154 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 GALNT5Q7Z7M9 940 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 MIB1Q86YT6 1006 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 HASPINQ8TF76 798 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 SYTL2Q9HCH5 934 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 SLC38A7Q9NVC3 462 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 KANSL3Q9P2N6 904 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 CYTH4Q9UIA0 394 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 ZDHHC2Q9UIJ5 367 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 LEF1Q9UJU2 399 aaPredicted RBP14.3□□□□□ -0.12
RTF1-201ENST00000389629 GMPPBQ9Y5P6 360 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 MARF1Q9Y4F3 1742 aaKnown RBP14.3□□□□□ -0.12
RTF1-201ENST00000389629 BTN3A1O00481 513 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 PTPN1P18031 435 aaKnown RBP14.3□□□□□ -0.12
RTF1-201ENST00000389629 DNAJB2P25686 324 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 ADORA2AP29274 412 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 CDK18Q07002 472 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 GK3PQ14409 553 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 RAB6CQ53S08 254 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 MARC1Q5VT66 337 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 WSCD1Q658N2 575 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 MAP1SQ66K74 1059 aaPredicted RBP14.3□□□□□ -0.12
RTF1-201ENST00000389629 IL27RAQ6UWB1 636 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 GCNT7Q6ZNI0 430 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 CLYBLQ8N0X4 340 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 PIWIL1Q96J94 861 aaKnown RBP14.3□□□□□ -0.12
RTF1-201ENST00000389629 OXCT2Q9BYC2 517 aaPredicted RBP14.3□□□□□ -0.12
RTF1-201ENST00000389629 SENP6Q9GZR1 1112 aaPredicted RBP14.3□□□□□ -0.12
RTF1-201ENST00000389629 RAB6CQ9H0N0 254 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 DPEP3Q9H4B8 488 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 DKK3Q9UBP4 350 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 TUBGCP4Q9UGJ1 667 aa14.3□□□□□ -0.12
RTF1-201ENST00000389629 IRS2Q9Y4H2 1338 aa14.29□□□□□ -0.12
RTF1-201ENST00000389629 ECM29Q5VYK3 1845 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms